Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type IV Classification (family/domain) cptAB/-
Location 470254..470890 Replicon chromosome
Accession NZ_CP094545
Organism Acinetobacter sp. YH16056_T

Toxin (Protein)


Gene name cptA Uniprot ID -
Locus tag MST17_RS02320 Protein ID WP_078189263.1
Coordinates 470504..470890 (+) Length 129 a.a.

Antitoxin (Protein)


Gene name cptB Uniprot ID -
Locus tag MST17_RS02315 Protein ID WP_078189264.1
Coordinates 470254..470511 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MST17_RS02295 (MST17_02295) 465850..466215 + 366 WP_005012953.1 50S ribosomal protein L17 -
MST17_RS02300 (MST17_02300) 466432..467922 + 1491 WP_180026054.1 NAD(P)/FAD-dependent oxidoreductase -
MST17_RS02305 (MST17_02305) 468057..468854 + 798 WP_257246880.1 alpha/beta hydrolase -
MST17_RS02310 (MST17_02310) 468899..470071 - 1173 WP_180026053.1 acyl-CoA dehydrogenase family protein -
MST17_RS02315 (MST17_02315) 470254..470511 + 258 WP_078189264.1 succinate dehydrogenase assembly factor 2 Antitoxin
MST17_RS02320 (MST17_02320) 470504..470890 + 387 WP_078189263.1 hypothetical protein Toxin
MST17_RS02325 (MST17_02325) 471411..472475 + 1065 WP_168379121.1 hypothetical protein -
MST17_RS02330 (MST17_02330) 472519..473091 + 573 WP_168379122.1 rhombosortase -
MST17_RS02335 (MST17_02335) 473282..475567 + 2286 WP_180026052.1 TRAP transporter large permease subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Flavinator of succinate dehydrogenase

(10-82)


Sequences

Toxin        


Download         Length: 129 a.a.        Molecular weight: 15471.61 Da        Isoelectric Point: 10.9047

>T239952 WP_078189263.1 NZ_CP094545:470504-470890 [Acinetobacter sp. YH16056_T]
MDNRQFKLKRSFLSHAFQFFIFAVLMTLLYQLLTPMLWGIFFLIGLVVYVLFFRKHLHVTSLDYLDGTDWSLQRLNRPVQ
RVQISHILDHQMYIVVYFMHARAKPVIIWRDQLSLKQWKSLKVLAKMI

Download         Length: 387 bp

>T239952 NZ_LS483414:1681010-1681345 [Streptococcus pyogenes]
TTGGACTATAAGAAATATCAGATTATCTATGCTCCTGATGTTTTAGAGAAGCTAAAAGAAATTCGTGATTATATTTCTCA
AAACTACTCCTCAACATCAGGTCAGCGTAAAATGGAGCAAATCATTAGCGACATAGAAAAACTCGAGGTTTTCCCAGAAG
TTGGTTTTGATGCCGATGAAAAATATGGTTCAAAAATCAGCCATTATCACAGCACTAAAGGTTACACCTTAAGTAAAGAT
TATATTGTCCTATACCATATCGAGGGGGAAGAAAATAGGGTCGCTATTGATTACTTGCTTCCTACTCAAAGCGACTATAT
AAAGTTATTCAAATAA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 10126.55 Da        Isoelectric Point: 4.5716

>AT239952 WP_078189264.1 NZ_CP094545:470254-470511 [Acinetobacter sp. YH16056_T]
MTDEISLEERKVIYRARRGLKEIDVYFDPYVKNYYLQADAAEKDMFAELVAAEDPDLLDWFMEVSEPPRPELKTFIQKLK
HYVHG

Download         Length: 258 bp

>AT239952 NZ_LS483414:1680733-1681020 [Streptococcus pyogenes]
ATGACTACAGTAAAAAAAAACAGAGCGGTTACCTTTCAAGCTAATAAAGAATTGGTAAGCGAAGCAATGACAGTATTAAA
CAAAAAAAATTTAACCTTATCATCTGCTTTAAGATTATTCCTACAAAATGTCGTTGTCACAAACGAGGTTGACTTATTGA
CGGAAGAGGAGTTAGAGAAAGAAAAACTTTTCAAGCAATTTCAAGCTGAAATCAACAAAAATATTGAGGACGTTCGTCAA
GGGAAGTTTTATACCTCTGAAGAAGTGAGGGCTGAACTTGGACTATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References