Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | IV | Classification (family/domain) | cptAB/Cpta(toxin) |
Location | 3545226..3545889 | Replicon | chromosome |
Accession | NZ_CP094313 | ||
Organism | Edwardsiella anguillarum strain R18-14-16 |
Toxin (Protein)
Gene name | cptA | Uniprot ID | - |
Locus tag | MQ086_RS16525 | Protein ID | WP_034164690.1 |
Coordinates | 3545226..3545642 (-) | Length | 139 a.a. |
Antitoxin (Protein)
Gene name | cptB | Uniprot ID | D0ZDY6 |
Locus tag | MQ086_RS16530 | Protein ID | WP_012849755.1 |
Coordinates | 3545623..3545889 (-) | Length | 89 a.a. |
Genomic Context
Location: 3544689..3545201 (513 bp)
Type: Others
Protein ID: WP_034164689.1
Type: Others
Protein ID: WP_034164689.1
Location: 3546238..3547236 (999 bp)
Type: Others
Protein ID: WP_034164692.1
Type: Others
Protein ID: WP_034164692.1
Location: 3549740..3550390 (651 bp)
Type: Others
Protein ID: WP_034164746.1
Type: Others
Protein ID: WP_034164746.1
Location: 3541156..3542889 (1734 bp)
Type: Others
Protein ID: WP_034164685.1
Type: Others
Protein ID: WP_034164685.1
Location: 3542894..3543610 (717 bp)
Type: Others
Protein ID: WP_034164686.1
Type: Others
Protein ID: WP_034164686.1
Location: 3543638..3544537 (900 bp)
Type: Others
Protein ID: WP_034164688.1
Type: Others
Protein ID: WP_034164688.1
Location: 3545226..3545642 (417 bp)
Type: Toxin
Protein ID: WP_034164690.1
Type: Toxin
Protein ID: WP_034164690.1
Location: 3545623..3545889 (267 bp)
Type: Antitoxin
Protein ID: WP_012849755.1
Type: Antitoxin
Protein ID: WP_012849755.1
Location: 3547278..3548102 (825 bp)
Type: Others
Protein ID: WP_034164693.1
Type: Others
Protein ID: WP_034164693.1
Location: 3548259..3549131 (873 bp)
Type: Others
Protein ID: WP_034164695.1
Type: Others
Protein ID: WP_034164695.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
MQ086_RS16505 (MQ086_16480) | 3541156..3542889 | - | 1734 | WP_034164685.1 | single-stranded-DNA-specific exonuclease RecJ | - |
MQ086_RS16510 (MQ086_16485) | 3542894..3543610 | - | 717 | WP_034164686.1 | bifunctional protein-disulfide isomerase/oxidoreductase DsbC | - |
MQ086_RS16515 (MQ086_16490) | 3543638..3544537 | - | 900 | WP_034164688.1 | site-specific tyrosine recombinase XerD | - |
MQ086_RS16520 (MQ086_16495) | 3544689..3545201 | + | 513 | WP_034164689.1 | flavodoxin FldB | - |
MQ086_RS16525 (MQ086_16500) | 3545226..3545642 | - | 417 | WP_034164690.1 | protein YgfX | Toxin |
MQ086_RS16530 (MQ086_16505) | 3545623..3545889 | - | 267 | WP_012849755.1 | FAD assembly factor SdhE | Antitoxin |
MQ086_RS16535 (MQ086_16510) | 3546238..3547236 | + | 999 | WP_034164692.1 | tRNA-modifying protein YgfZ | - |
MQ086_RS16540 (MQ086_16515) | 3547278..3548102 | - | 825 | WP_034164693.1 | shikimate 5-dehydrogenase | - |
MQ086_RS16545 (MQ086_16520) | 3548259..3549131 | - | 873 | WP_034164695.1 | nucleoside-specific channel-forming protein Tsx | - |
MQ086_RS16550 (MQ086_16525) | 3549740..3550390 | + | 651 | WP_034164746.1 | hemolysin III family protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
No matching records found |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 139 a.a. Molecular weight: 16229.03 Da Isoelectric Point: 11.6049
>T239565 WP_034164690.1 NZ_CP094313:c3545642-3545226 [Edwardsiella anguillarum]
VVLWRCNVHVSWRTQVMFLLGHGALVLAILLAPWPENYSAFWLVLLVAVIFECIRSQRRIARNRGELQLLTPQVWHWQLR
EWRLARRPWVSDLGALLILQSTHGVPCRRRLWLAADSMSREEWGQLRRALLDTGDDRA
VVLWRCNVHVSWRTQVMFLLGHGALVLAILLAPWPENYSAFWLVLLVAVIFECIRSQRRIARNRGELQLLTPQVWHWQLR
EWRLARRPWVSDLGALLILQSTHGVPCRRRLWLAADSMSREEWGQLRRALLDTGDDRA
Download Length: 417 bp
>T239565 NZ_LR898876:2038-2319 [Escherichia coli]
ATGATGGAGATATTCTGGACCATACTGGCCAGCCAGGACAGGAAGCGCATTCGTGAGTATATTGCGGAGCAGAACCTGAT
GGCTGCCATTGAACTGGACGAACGGATTGGTTATTCAGCCAGCAGCCTGGCCGGGCAGCCGTATAAAGGCCGCAACGGTC
GTGTGGAAGGTACCCGGGAACTGGTTATTCACCCGCATTTTGTTCTGGTTTATGAGGTCGACAGCCAGTGGGGAAAAGTG
TATATCCTGCGAGTATTGCATACTGCACAGAAGTGGCCATAG
ATGATGGAGATATTCTGGACCATACTGGCCAGCCAGGACAGGAAGCGCATTCGTGAGTATATTGCGGAGCAGAACCTGAT
GGCTGCCATTGAACTGGACGAACGGATTGGTTATTCAGCCAGCAGCCTGGCCGGGCAGCCGTATAAAGGCCGCAACGGTC
GTGTGGAAGGTACCCGGGAACTGGTTATTCACCCGCATTTTGTTCTGGTTTATGAGGTCGACAGCCAGTGGGGAAAAGTG
TATATCCTGCGAGTATTGCATACTGCACAGAAGTGGCCATAG
Antitoxin
Download Length: 89 a.a. Molecular weight: 10318.90 Da Isoelectric Point: 5.6951
>AT239565 WP_012849755.1 NZ_CP094313:c3545889-3545623 [Edwardsiella anguillarum]
MDINNKARVHWACRRGMRELDIAIMPFFEHEYDALNDADKQTFVRLLACDDPELFKWLMNQGKPDDADLARMITLIQTRN
KERGPLAL
MDINNKARVHWACRRGMRELDIAIMPFFEHEYDALNDADKQTFVRLLACDDPELFKWLMNQGKPDDADLARMITLIQTRN
KERGPLAL
Download Length: 267 bp
>AT239565 NZ_LR898876:1772-2041 [Escherichia coli]
ATGGCACAGGTTAATATGAGTTTAAGAATCGACGCTGAACTGAAGGATGCTTTTATGGCCGCTGCAAAAAGCATGGACCG
TAATGGCTCTCAGTTAATTCGGGATTTTATGCGCCAGACCGTTGAACGGCAGCATAATACTTGGTTCCGTGACCAGGTTG
CGGCAGGACGTCAGCAACTCGAACGCGGCGATGTGCTTCCCCATGATATGGTCGAATCCTCCGCTACTGCATGGCGGGAT
GAAATAAGCAGGAAGGTCGCCGGTAAATGA
ATGGCACAGGTTAATATGAGTTTAAGAATCGACGCTGAACTGAAGGATGCTTTTATGGCCGCTGCAAAAAGCATGGACCG
TAATGGCTCTCAGTTAATTCGGGATTTTATGCGCCAGACCGTTGAACGGCAGCATAATACTTGGTTCCGTGACCAGGTTG
CGGCAGGACGTCAGCAACTCGAACGCGGCGATGTGCTTCCCCATGATATGGTCGAATCCTCCGCTACTGCATGGCGGGAT
GAAATAAGCAGGAAGGTCGCCGGTAAATGA
Structures
Toxin
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Source | ID | Structure |
---|---|---|
No matching records found |
Antitoxin
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Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A034T2Q8 |