Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) Hha-TomB/-
Location 231688..232307 Replicon chromosome
Accession NZ_CP094227
Organism Klebsiella pneumoniae strain Bio3

Toxin (Protein)


Gene name Hha Uniprot ID R8WYV2
Locus tag MOO48_RS01140 Protein ID WP_002892050.1
Coordinates 231688..231906 (-) Length 73 a.a.

Antitoxin (Protein)


Gene name TomB Uniprot ID J2DPF6
Locus tag MOO48_RS01145 Protein ID WP_002892066.1
Coordinates 231933..232307 (-) Length 125 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MOO48_RS01105 (227735) 227735..227998 + 264 WP_002892011.1 type B 50S ribosomal protein L31 -
MOO48_RS01110 (227998) 227998..228138 + 141 WP_002892018.1 type B 50S ribosomal protein L36 -
MOO48_RS01115 (228135) 228135..228833 - 699 WP_004178762.1 GNAT family protein -
MOO48_RS01120 (228934) 228934..230385 + 1452 WP_002892023.1 PLP-dependent aminotransferase family protein -
MOO48_RS01125 (230360) 230360..230830 - 471 WP_002892026.1 YlaC family protein -
MOO48_RS01130 (230851) 230851..230991 + 141 WP_004147370.1 hypothetical protein -
MOO48_RS01135 (230963) 230963..231529 - 567 WP_002892030.1 maltose O-acetyltransferase -
MOO48_RS01140 (231688) 231688..231906 - 219 WP_002892050.1 HHA domain-containing protein Toxin
MOO48_RS01145 (231933) 231933..232307 - 375 WP_002892066.1 Hha toxicity modulator TomB Antitoxin
MOO48_RS01150 (232793) 232793..235939 - 3147 WP_002892069.1 multidrug efflux RND transporter permease subunit AcrB -
MOO48_RS01155 (235962) 235962..237155 - 1194 WP_004177236.1 multidrug efflux RND transporter periplasmic adaptor subunit AcrA -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Haemolysin expression modulating, HHA

(13-69)

Antitoxin

Biofilm formation regulator YbaJ

(1-116)


Sequences

Toxin        


Download         Length: 73 a.a.        Molecular weight: 8628.00 Da        Isoelectric Point: 8.9008

>T239314 WP_002892050.1 NZ_CP094227:c231906-231688 [Klebsiella pneumoniae]
MSDKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPTSVWKFIR

Download         Length: 219 bp

>T239314 NZ_LR890671:c14506-14201 [Klebsiella pneumoniae]
ATGCAGTTTAAGGTTTATGCCTATAAAAGAGAGAGCCGCTATCGTCTGTTCGTGGATGTGCAGAGTGACATCATCGATAC
CCCCGGGCGACGGATGGTGGTCCCGCTGGCCAGCGCCCGGCTGCTGTCGGATAAGGTCTCCCGTGAACTCTATCCGGTGG
TGCACATCGGGGACGACAGCTACCGCCTGATGACCACGGACATGGCCAGCGTCACGGCCTCCGTCACCGGGGAGGAAGTG
GCCGATCTCAGCCACCGGGAAAATGACATCAAAAATGCGATAAACCTGATGTTCTGGGGAATTTGA

Antitoxin


Download         Length: 125 a.a.        Molecular weight: 14368.06 Da        Isoelectric Point: 4.8989

>AT239314 WP_002892066.1 NZ_CP094227:c232307-231933 [Klebsiella pneumoniae]
MDEYSPKRHDIAQLRFLCETLYHDCLANLEESNHGWVNDPTSAVNLQLNELIEHIATFALNYKIKYAEDNKLIAQVDEYL
DDTFTLFSNYGINSTDLQKWKKSGNRLFRCFVNASRENPASLSC

Download         Length: 375 bp

>AT239314 NZ_LR890671:c14726-14508 [Klebsiella pneumoniae]
ATGAAGCAGCGCATCACCGTCACCATAGACAGCGACAGTTATCAGTTACTGAAATCCGCGGACGTCAATATCTCCGGCCT
GGTGAACAGGGCCATGCAGAATGAGGCCCGTCGTCTGCGTGCCGAACGCTGGCAGGCCGAAAATCAGGAAGGGATGGCCG
AGGTTGCCCGCTTTATTGAGATGAACGGTTCATTCGCCGACGAAAACAGGGACTGGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2P8K6F2

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GJ93

References