Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | Txe-Axe/Txe-RelB |
Location | 2726510..2727029 | Replicon | chromosome |
Accession | NZ_CP092538 | ||
Organism | Staphylococcus aureus strain VMRSA-WC123 |
Toxin (Protein)
Gene name | Txe | Uniprot ID | Q848U6 |
Locus tag | MKI57_RS13680 | Protein ID | WP_000588503.1 |
Coordinates | 2726772..2727029 (+) | Length | 86 a.a. |
Antitoxin (Protein)
Gene name | Axe | Uniprot ID | Q83WJ8 |
Locus tag | MKI57_RS13675 | Protein ID | WP_000388479.1 |
Coordinates | 2726510..2726779 (+) | Length | 90 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
MKI57_RS13645 (MKI57_002709) | 2722081..2722497 | - | 417 | WP_001232859.1 | hypothetical protein | - |
MKI57_RS13650 (MKI57_002710) | 2722500..2722784 | - | 285 | WP_000353844.1 | hypothetical protein | - |
MKI57_RS13655 (MKI57_002711) | 2723150..2723374 | + | 225 | WP_000410576.1 | hypothetical protein | - |
MKI57_RS14700 (MKI57_002712) | 2723676..2723762 | - | 87 | WP_125669474.1 | type I toxin-antitoxin system Fst family toxin | - |
MKI57_RS13660 (MKI57_002713) | 2724497..2725177 | - | 681 | WP_001015311.1 | IS6-like element IS1216 family transposase | - |
MKI57_RS13665 | 2725523..2725819 | + | 297 | WP_200857964.1 | hypothetical protein | - |
MKI57_RS13670 (MKI57_002715) | 2726200..2726379 | + | 180 | WP_001120991.1 | hypothetical protein | - |
MKI57_RS13675 (MKI57_002716) | 2726510..2726779 | + | 270 | WP_000388479.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
MKI57_RS13680 (MKI57_002717) | 2726772..2727029 | + | 258 | WP_000588503.1 | Txe/YoeB family addiction module toxin | Toxin |
MKI57_RS13685 (MKI57_002718) | 2727666..2728490 | + | 825 | WP_001809248.1 | hypothetical protein | - |
MKI57_RS13690 (MKI57_002719) | 2728655..2729269 | - | 615 | WP_001261742.1 | recombinase family protein | - |
MKI57_RS13695 (MKI57_002720) | 2729719..2731044 | + | 1326 | WP_000969590.1 | Y-family DNA polymerase | - |
MKI57_RS13700 (MKI57_002721) | 2731037..2731387 | + | 351 | WP_000568378.1 | hypothetical protein | - |
MKI57_RS13705 (MKI57_002722) | 2731384..2731563 | + | 180 | WP_001021554.1 | hypothetical protein | - |
MKI57_RS13710 (MKI57_002723) | 2731699..2731989 | + | 291 | WP_000026576.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 86 a.a. Molecular weight: 10206.53 Da Isoelectric Point: 8.4369
>T236483 WP_000588503.1 NZ_CP092538:2726772-2727029 [Staphylococcus aureus]
MIKAWSDDAWDDYLYWHEQGNKSNIKKINKLIKDIDRSPFAGLGKPEPLKHDLSGKWSRRITDEHRLIYRVENETIFIYS
AKDHY
MIKAWSDDAWDDYLYWHEQGNKSNIKKINKLIKDIDRSPFAGLGKPEPLKHDLSGKWSRRITDEHRLIYRVENETIFIYS
AKDHY
Download Length: 258 bp
>T236483 NZ_LR594689:609824-610276 [Variovorax sp. WDL1]
ATGAGCGCCGAAGCCGCAACGAACTCGTTGCGCCTGCTGGATACGAACACCGTCTTCGAGTTGATGCGCCACCCAGGGGG
CAAGGTTGCCGCGCGACTCCGACGCCTGGCGCAAGAACAGCCTGACGGCAGAGTCTGCACCAGCGCCGTGGTGGACTGCG
AGTTGCGATTCGGTGTGAACCGCAAAGGATCGGCACGACTGGCCGATGCGTACACCCGCGCCATGTCCGTCATCGAAGTT
CGCGACCTGCCTGCTGCAGTCGCTCCGATCTACGCAGACATTCGCACCCAGCTCGAACAGGTTGGCAAGCCGATCGGCCC
CAACGATCTGCTGATTGCCGCCCATGCGCTGGCACTGGACGCAACGCTGGTGACCCACAACGAAAGTGAATTCCGGCGCG
TGCCCGGACTTGTCGTCGAAAACTGGCTGGAATCAGCCCATGAACATGAGTAG
ATGAGCGCCGAAGCCGCAACGAACTCGTTGCGCCTGCTGGATACGAACACCGTCTTCGAGTTGATGCGCCACCCAGGGGG
CAAGGTTGCCGCGCGACTCCGACGCCTGGCGCAAGAACAGCCTGACGGCAGAGTCTGCACCAGCGCCGTGGTGGACTGCG
AGTTGCGATTCGGTGTGAACCGCAAAGGATCGGCACGACTGGCCGATGCGTACACCCGCGCCATGTCCGTCATCGAAGTT
CGCGACCTGCCTGCTGCAGTCGCTCCGATCTACGCAGACATTCGCACCCAGCTCGAACAGGTTGGCAAGCCGATCGGCCC
CAACGATCTGCTGATTGCCGCCCATGCGCTGGCACTGGACGCAACGCTGGTGACCCACAACGAAAGTGAATTCCGGCGCG
TGCCCGGACTTGTCGTCGAAAACTGGCTGGAATCAGCCCATGAACATGAGTAG
Antitoxin
Download Length: 90 a.a. Molecular weight: 10373.51 Da Isoelectric Point: 4.4346
>AT236483 WP_000388479.1 NZ_CP092538:2726510-2726779 [Staphylococcus aureus]
MEAVAYSNFRQNLRSYMKQVNEDAETLIVTSKDVEDTVVVLSKRDYDSMQETLRTLSNNYVMEKIRRGDEQFSKGAFKTH
DLIEVESDD
MEAVAYSNFRQNLRSYMKQVNEDAETLIVTSKDVEDTVVVLSKRDYDSMQETLRTLSNNYVMEKIRRGDEQFSKGAFKTH
DLIEVESDD
Download Length: 270 bp
>AT236483 NZ_LR594689:609555-609827 [Variovorax sp. WDL1]
ATGTCTGACCCCCACCTTCCTGCCCGCAGTGTCCGGCTGTTTCGCAATGGCGCAAACCAGGCTGTGCGCATCCCGCGCGA
GTTCGAGCTTCCGGGAAACGAGGCGCTGATGCGACGCGACGGTGACACCCTGGTGATCGAGCCCGTGTACCCTGTGCCCC
GCAAAGGCACCCTGGCCGGCTTGGCCGCGGTGCTGGCGACGATGGAACCGCTGGACGAAGAATTCCCCGATGTAGACAAA
GGTCTGCTGCCCCTGGACGACGTCGATCTATGA
ATGTCTGACCCCCACCTTCCTGCCCGCAGTGTCCGGCTGTTTCGCAATGGCGCAAACCAGGCTGTGCGCATCCCGCGCGA
GTTCGAGCTTCCGGGAAACGAGGCGCTGATGCGACGCGACGGTGACACCCTGGTGATCGAGCCCGTGTACCCTGTGCCCC
GCAAAGGCACCCTGGCCGGCTTGGCCGCGGTGCTGGCGACGATGGAACCGCTGGACGAAGAATTCCCCGATGTAGACAAA
GGTCTGCTGCCCCTGGACGACGTCGATCTATGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A828ZXQ8 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A828ZWU7 |