Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | TsaAT/- |
| Location | 851899..852376 | Replicon | chromosome |
| Accession | NZ_CP092538 | ||
| Organism | Staphylococcus aureus strain VMRSA-WC123 | ||
Toxin (Protein)
| Gene name | TsaT | Uniprot ID | T1Y7S2 |
| Locus tag | MKI57_RS04095 | Protein ID | WP_000052076.1 |
| Coordinates | 851899..852087 (-) | Length | 63 a.a. |
Antitoxin (Protein)
| Gene name | TsaA | Uniprot ID | T1Y6P8 |
| Locus tag | MKI57_RS04100 | Protein ID | WP_001059690.1 |
| Coordinates | 852116..852376 (-) | Length | 87 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKI57_RS04065 (MKI57_000802) | 847893..848414 | + | 522 | WP_000824482.1 | hypothetical protein | - |
| MKI57_RS04070 (MKI57_000803) | 848755..849441 | + | 687 | WP_000141557.1 | thermonuclease family protein | - |
| MKI57_RS04075 (MKI57_000804) | 849798..849998 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| MKI57_RS04080 (MKI57_000805) | 850490..850708 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| MKI57_RS04085 (MKI57_000806) | 850770..851054 | - | 285 | WP_001004399.1 | hypothetical protein | - |
| MKI57_RS04090 (MKI57_000807) | 851142..851711 | - | 570 | WP_001106654.1 | lipoprotein N-acylation protein LnsA | - |
| MKI57_RS04095 (MKI57_000808) | 851899..852087 | - | 189 | WP_000052076.1 | hypothetical protein | Toxin |
| MKI57_RS04100 (MKI57_000809) | 852116..852376 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin |
| MKI57_RS04105 (MKI57_000810) | 852717..852920 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| MKI57_RS04110 (MKI57_000811) | 852917..853153 | - | 237 | WP_000349581.1 | hypothetical protein | - |
| MKI57_RS04115 (MKI57_000812) | 853378..853959 | + | 582 | WP_001140693.1 | histidine phosphatase family protein | - |
| MKI57_RS04120 (MKI57_000813) | 854032..854649 | - | 618 | WP_000255551.1 | LysE/ArgO family amino acid transporter | - |
| MKI57_RS04125 (MKI57_000814) | 854804..855298 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| MKI57_RS04130 (MKI57_000815) | 855697..856119 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| MKI57_RS04135 (MKI57_000816) | 856267..856983 | + | 717 | WP_000150011.1 | type I 3-dehydroquinate dehydratase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | vWbp | 818221..862975 | 44754 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 63 a.a. Molecular weight: 7142.82 Da Isoelectric Point: 9.9971
>T236472 WP_000052076.1 NZ_CP092538:c852087-851899 [Staphylococcus aureus]
MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFGVL
MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFGVL
Download Length: 189 bp
>T236472 NZ_LR594666:c5253365-5252913 [Variovorax sp. SRS16]
ATGCGGGTCTACCGGATCAGCAAGGCCGTCCATGTCGCGACCGCCCTGTCGGGCCAGGGCGCGGCACTGTATGCGGGGCG
ATGGAAATCCAGGGGCGTGCGTCTGGCGTACATGGCGGGCTCGGCCGCCCTTGCCATGCTCGAGTTGCTGGTCCACGTCG
ACAAGGAAGATGCGCCCACGGGCCTGCGGCTGCTTTCCTACGAGCTGCCCGACGACGCCGTGCAGCCGCTGCACGCGCTG
CCGCCGGGATGGAGCGCGCTGCCCTATTCACCTGCGGTACAGGCGGTGGGTGATCGCTGGATCGCCTCGGGCCGTTCGCT
GGCCTTGCGCGTGCCGAGCGCCGTGGCGCGGCACGAGAGCAACGTGCTCGTCAATCCCGGTCACGCGCGCTTCGCGGAGA
TTGCGTTGGTCGCCGATGAAACATTGACGCTGGACGCGCGCCTGTTCGCATAG
ATGCGGGTCTACCGGATCAGCAAGGCCGTCCATGTCGCGACCGCCCTGTCGGGCCAGGGCGCGGCACTGTATGCGGGGCG
ATGGAAATCCAGGGGCGTGCGTCTGGCGTACATGGCGGGCTCGGCCGCCCTTGCCATGCTCGAGTTGCTGGTCCACGTCG
ACAAGGAAGATGCGCCCACGGGCCTGCGGCTGCTTTCCTACGAGCTGCCCGACGACGCCGTGCAGCCGCTGCACGCGCTG
CCGCCGGGATGGAGCGCGCTGCCCTATTCACCTGCGGTACAGGCGGTGGGTGATCGCTGGATCGCCTCGGGCCGTTCGCT
GGCCTTGCGCGTGCCGAGCGCCGTGGCGCGGCACGAGAGCAACGTGCTCGTCAATCCCGGTCACGCGCGCTTCGCGGAGA
TTGCGTTGGTCGCCGATGAAACATTGACGCTGGACGCGCGCCTGTTCGCATAG
Antitoxin
Download Length: 87 a.a. Molecular weight: 9940.09 Da Isoelectric Point: 4.0624
>AT236472 WP_001059690.1 NZ_CP092538:c852376-852116 [Staphylococcus aureus]
MNNILLNAINIVITTTFVIFNILITYNKDLDDLCWLLPGIIICGVILIVSFTIAMITKNWLSEILFFINIVLVLYYIYPI
FYSFIG
MNNILLNAINIVITTTFVIFNILITYNKDLDDLCWLLPGIIICGVILIVSFTIAMITKNWLSEILFFINIVLVLYYIYPI
FYSFIG
Download Length: 261 bp
>AT236472 NZ_LR594666:c5253628-5253365 [Variovorax sp. SRS16]
ATGGCGATTCCGGCACGGACCTTCCATCGCCGGCAGCAGAAGGCCGAAACGCTGTCCGCCACCGAGACGGACCGGGTCCT
GCGGATCGCGCGCGTCGCGAGCCACGCGATGCAGGTCTTCGGCAGCGAAGAAAAGGCCCGGCGCTGGCTGTCCAGGGACA
ACCGGATGCTCGGCGCGACACCGCTGCAGATGCTCTCCACCGATGCCGGCGCGCACGAAGTCGAAGCCGAGCTGAACCGC
ATCGAGTTCGGCGACTTCGCCTGA
ATGGCGATTCCGGCACGGACCTTCCATCGCCGGCAGCAGAAGGCCGAAACGCTGTCCGCCACCGAGACGGACCGGGTCCT
GCGGATCGCGCGCGTCGCGAGCCACGCGATGCAGGTCTTCGGCAGCGAAGAAAAGGCCCGGCGCTGGCTGTCCAGGGACA
ACCGGATGCTCGGCGCGACACCGCTGCAGATGCTCTCCACCGATGCCGGCGCGCACGAAGTCGAAGCCGAGCTGAACCGC
ATCGAGTTCGGCGACTTCGCCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A0E0VP18 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A0E0VN56 |