Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) vapBC/VapC-VagC
Location 1647143..1647774 Replicon chromosome
Accession NZ_CP092359
Organism Wielerella bovis strain 08LB461

Toxin (Protein)


Gene name vapC Uniprot ID -
Locus tag MIS33_RS08150 Protein ID WP_249447532.1
Coordinates 1647382..1647774 (+) Length 131 a.a.

Antitoxin (Protein)


Gene name vapB Uniprot ID -
Locus tag MIS33_RS08145 Protein ID WP_249442094.1
Coordinates 1647143..1647385 (+) Length 81 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

PIN domain

(3-121)

Antitoxin

SpoVT-AbrB domain

(7-44)


Sequences

Toxin        


Download         Length: 131 a.a.        Molecular weight: 14757.99 Da        Isoelectric Point: 9.3852

>T235953 WP_249447532.1 NZ_CP092359:1647382-1647774 [Wielerella bovis]
MKYLLDTNIIIAFQKQHQGLLAQMKKHSVNDFALSNIVLFELAFGAYNSQKVDENLHKLSQLRFPTLTFNSQDAYHAGKI
RANLQKQGTPIGAYDTLIAGQAIAQNLILISHNVKEFERVEGLKFENWLV

Download         Length: 393 bp

>T235953 NZ_LR134514:c2110289-2109948 [Pasteurella multocida subsp. septica]
ATGGATATAATTTTCAAATCTCGAAAATTAGAAAAGGAATTAAACTCTGAAATCTACATTTTAAAGAGATACGGAACAGT
CTGCGGAAAAAAGATTAAGCTCGCAATGACCGCACTTAGGGCAGCGCCAAGTTTGCAGACATTTTTTCCACCATACAGCA
AGCCTTATCGTTGCCACGAACTTTTAGGTGACCGCAAGGGGCAAATAAGCATAGATGCACAACACCCCTATAGAGTCTTG
TTTGAAGCAAATCATAATCCGTTGCCGACCCTTGATGCAGGTGGGCTAGATTGGTCAAAAGTTACATCTATTCGGATCTT
ATCAATAACAGATACACATTAG

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9406.57 Da        Isoelectric Point: 4.3566

>AT235953 WP_249442094.1 NZ_CP092359:1647143-1647385 [Wielerella bovis]
MTTAKLFWTGNSQAVRLPKEFRFEGKEVRISKHGNQVIIEPIADDWGWVNELEPFDNTMEQAILELKNDVPQERDWSVFE

Download         Length: 243 bp

>AT235953 NZ_LR134514:c2109935-2108850 [Pasteurella multocida subsp. septica]
ATGAGCGAAAATCAATACTACCCTGACTATGCAGTTCTGCCTGGTGAAGTGTTGGAATTTGAGCTAGATGGTTTAGAAAT
AAGCCAAAAAGAACTCAGCAATAAAACCGGCATTTCTACCAAGCACATTAGCAATATTATCAATGGCAAATCTCCGATTA
CACCTGAAACAGCAATTGCGCTCGAGCGAGTGTTGGGTAAGCCTGCGCGTTATTGGCTAAACTTGGAAACTCTATATCAA
GAGGCACTAGCTCGTATTGCAGATAAAAAAGAGCTAGAACGACATGCAGAATGGGTAAAACAGTTCCCAAATTATATTCT
GCAAAAATTAGGTTTTACCCAAAAACACACTGATATTTCAAGTAAAGTTGATACTTTGCTGCGTTTCTTTGGCGTGGCAA
GTCCTGCTGATTACGAAACTGTTTGGGGACAAATTGGTGTTCAATACCGGCAAGATAAGCGCACTACAATCTGTCAGCAC
AGTAGCTCTGCTTGGTTAAGAGCGGGGGAGATTAAGGCGAGTGAAATAATATGTCAGCCTTACTCAGAGTCAGGTTTTAA
GCAAGCGCTAGAAAAAATTAAAGCGCTCACTAAAGAAACAGAACCAAGTCATTTCATACCTGAACTCATCAATATTTGTG
CAAGTGTTGGTGTAGCTGTTGTATTTGTACCTTGCTTTCCTAACACAGGGATTAGTGGAGCAACTCGTTGGCTGTCATCG
GATAAAGCTGTAATTCAGTTGAGTTTGCGCTATAAAACGAACGATCATTTATGGTTTACTTTCTTTCATGAAGCAGGACA
TATTTTATTGCACGGCAAAAAAACACTACATTTGGAATTTAATAGTAAGACAGTTCTTGCTGATGAAGAGACTGAAGCGA
ATGATTTTGCCCAAAAGTATTTAATTCCTCGACCTATATGGCGGAATCTAATTCAAAAAGTAGCTGTTACCGAGCAGCAT
ATCCGAGCTGCTGCTGAAGAAATCGGCATTGCCGAGGGTATTATTGTCGGACAGTTACAGCACTATAAAAAATTACGCTA
TGATCAGCTTAATCATTTAAAAGTACGTTACACTTGGCAGCACTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References