Detailed information of TA system TA235854

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): shpA-brnA/BrnT_toxin-BrnA
• Location: 1116272..1116782
• Replicon: chromosome
• Accession: NZ_CP092283
• Organism: Marinobacter sp. M4C

Toxin (Protein)

• Gene name: shpA
• Uniprot ID: -
• Locus tag: MIH16_RS05405
• Protein ID: WP_249007892.1
• Coordinates: 1116272..1116544 (+)
• Length: 91 a.a.

Antitoxin (Protein)

• Gene name: brnA
• Uniprot ID: -
• Locus tag: MIH16_RS05410
• Protein ID: WP_249007893.1
• Coordinates: 1116528..1116782 (+)
• Length: 85 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Ribonuclease toxin, BrnT, of type II toxin-antitoxin system (5-82)

Antitoxin

• BrnA antitoxin of type II toxin-antitoxin system (37-77)

Sequences

Toxin

Protein

• Length: 91 a.a.
• Molecular weight: 10694.23 Da
• Isoelectric Point: 5.7237

>T235854 WP_249007892.1 NZ_CP092283:1116272-1116544 [Marinobacter sp. M4C]
MYFEWDDSKNAANISKHGIDFRDAIDMFNHPMLTAIDECFMYGEERWTAIGLMREMVGVVVYTERRESVVRIISARKATR
REVRLYEQNI

Nucleotide

• Length: 273 bp

>T235854 NZ_LR134420:c74643-74323 [Legionella adelaidensis]
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TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
T

Antitoxin

Protein

• Length: 85 a.a.
• Molecular weight: 9964.32 Da
• Isoelectric Point: 5.8560

>AT235854 WP_249007893.1 NZ_CP092283:1116528-1116782 [Marinobacter sp. M4C]
MSKTSKTDWKRLTEMEDDAIDTSDISELDDKFFQNAELLIPTKQPVTLRIDEDVLVWFKAQGRGYQTRINKLLRHYMESQ
VTKR

Nucleotide

• Length: 255 bp

>AT235854 NZ_LR134420:c74863-74630 [Legionella adelaidensis]
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
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