Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-YafN
Location 1050716..1051244 Replicon chromosome
Accession NZ_CP092283
Organism Marinobacter sp. M4C

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag MIH16_RS05060 Protein ID WP_249007832.1
Coordinates 1050716..1051006 (-) Length 97 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag MIH16_RS05065 Protein ID WP_249007833.1
Coordinates 1050996..1051244 (-) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(7-85)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 97 a.a.        Molecular weight: 11097.04 Da        Isoelectric Point: 10.7120

>T235852 WP_249007832.1 NZ_CP092283:c1051006-1050716 [Marinobacter sp. M4C]
MSSKYALEFKPSALKEWKKLAPALQAQFKKKLKQRLDDPHVPPDALSDLKNCYKIKLRSAGYRLVYEVENERIVVTVVAV
GKRERGAVYSRAHRRI

Download         Length: 291 bp

>T235852 NZ_LR134418:106131-106412 [Legionella adelaidensis]
ATGAGGACGATTGAATACACAACACAATTTAAACGTGATTATAAGCGCGAAATAAAAGGTAAATACAAAGCAGTCTTCAG
TAATCTCTTTATTGAGATTATTGATACATTAGCACGAGATGAACCACTGGCAGCTAAACACCGGGATCATGCGCTATCTA
ATAATTGGCAGGATCATCGTGATTGCCATATAAAACCTGATTTAGTTTTAATTTATCGCAAGCCCGATAGGCAAACATTG
CAATTGGTAAGATTGGGCTCTCATAGTGAGCTTAGTCTTTAA

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9139.49 Da        Isoelectric Point: 4.5357

>AT235852 WP_249007833.1 NZ_CP092283:c1051244-1050996 [Marinobacter sp. M4C]
MTQPIYTEIAASISELKKNPMAAVSAGEGFPIVVLNRNKPAFYCVPADVYEAMLDRLDDQELARLVESRRSERSIPVSLN
EL

Download         Length: 249 bp

>AT235852 NZ_LR134418:105878-106144 [Legionella adelaidensis]
ATGACTACTAATGCAGTGGTAAGAGCGAGAATTGATGAGCATATTAAAGAAGAGGCGTCAGCCGTGCTTGCATCAATGGG
GCTAACCGTGTCTGATGCATTCCGTATGTTGCTAACGCGCATAGCTAAAGAGCATGCGTTGCCTTTTGAACCTCTTATTC
CAAACCAACAAACTATCAATGCGATGAAGGAAGCCCGACGTGGCCAGTTAAAATCGTTTAAAACAGTTCAATCGCTCATG
GATGATTTAAATAATGAGGACGATTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References