Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) DhiAT/-
Location 254156..254934 Replicon chromosome
Accession NZ_CP092106
Organism Vibrio sp. JC009

Toxin (Protein)


Gene name dhiT Uniprot ID -
Locus tag L3Q72_RS01200 Protein ID WP_275130885.1
Coordinates 254156..254419 (+) Length 88 a.a.

Antitoxin (Protein)


Gene name dhiA Uniprot ID -
Locus tag L3Q72_RS01205 Protein ID WP_275130886.1
Coordinates 254419..254934 (+) Length 172 a.a.

Genomic Context

L3Q72_RS01180L3Q72_RS01190L3Q72_RS01195L3Q72_RS01200L3Q72_RS01205L3Q72_RS01185L3Q72_RS01210L3Q72_RS01215L3Q72_RS01220L3Q72_RS01225L3Q72_RS01230
Location: 249157..251031 (1875 bp)
Type: Others
Protein ID: WP_275130882.1
Location: 251888..252178 (291 bp)
Type: Others
Protein ID: WP_031493033.1
Location: 252225..253871 (1647 bp)
Type: Others
Protein ID: WP_275130884.1
Location: 254156..254419 (264 bp)
Type: Toxin
Protein ID: WP_275130885.1
Location: 254419..254934 (516 bp)
Type: Antitoxin
Protein ID: WP_275130886.1
Location: 251343..251597 (255 bp)
Type: Others
Protein ID: WP_275130883.1
Location: 255232..255915 (684 bp)
Type: Others
Protein ID: WP_275130887.1
Location: 256267..256899 (633 bp)
Type: Others
Protein ID: WP_004410522.1
Location: 257144..258013 (870 bp)
Type: Others
Protein ID: WP_275130888.1
Location: 258045..258257 (213 bp)
Type: Others
Protein ID: WP_275130889.1
Location: 258273..259244 (972 bp)
Type: Others
Protein ID: WP_275130890.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
L3Q72_RS01180 (L3Q72_01180)249157..251031+1875WP_275130882.1argininosuccinate lyase-
L3Q72_RS01185 (L3Q72_01185)251343..251597-255WP_275130883.1DUF3624 domain-containing protein-
L3Q72_RS01190 (L3Q72_01190)251888..252178+291WP_031493033.1co-chaperone GroES-
L3Q72_RS01195 (L3Q72_01195)252225..253871+1647WP_275130884.1chaperonin GroEL-
L3Q72_RS01200 (L3Q72_01200)254156..254419+264WP_275130885.1DUF4160 domain-containing proteinToxin
L3Q72_RS01205 (L3Q72_01205)254419..254934+516WP_275130886.1transcriptional regulatorAntitoxin
L3Q72_RS01210 (L3Q72_01210)255232..255915-684WP_275130887.1DNA-3-methyladenine glycosylase I-
L3Q72_RS01215 (L3Q72_01215)256267..256899-633WP_004410522.1cAMP-activated global transcriptional regulator CRP-
L3Q72_RS01220 (L3Q72_01220)257144..258013-870WP_275130888.1phosphoribulokinase-
L3Q72_RS01225 (L3Q72_01225)258045..258257-213WP_275130889.1YheU family protein-
L3Q72_RS01230 (L3Q72_01230)258273..259244-972WP_275130890.1hydrolase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Protein of unknown function DUF4160

(10-74)

Antitoxin

Uncharacterized protein HI1420

(82-159)


Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10090.65 Da        Isoelectric Point: 6.4825

>T235703 WP_275130885.1 NZ_CP092106:254156-254419 [Vibrio sp. JC009]
MPEILKRLLGLKFQMRYEDNDFHNRPHIHVSFGEYEASIAIDDIEVLAGFLPPKKRKLAEFYIDKHRDELLLAWDGAVIG
QGIGRIN

Download         Length: 264 bp

>T235703 NZ_LR134330:5537840-5538418 [Pseudomonas aeruginosa]
ATGTCCCTCGAACTGCTGAGCAACCGCCTCGAATTCCTCCGCGAAGCCGAACGCCTGAAAGACGTCCTGCGCTCCGCGCA
CACCTCCTCCGGCCGCCCGGAAAGCACCGCCGAACATAGCTGGCGGCTTTGCCTGATGGCACTGGCCTTCGAGGACCAAC
TGGCCGGCCTGGACCTCGGCAAGGTTCTGCGCATGTGCGTGGTCCACGACCTCGGCGAAGCGATCCACGGCGACATCCCC
GCCGTCGAGCAAGCGGCGCACCCGGACAAGGGCGAACAGGAACGCGCCGACCTGTTGCAGCTGACCCGTCATCTGGACAC
ACCGCTGCGCGATCGCCTGCTCGCCCTGTGGGACGAATACGAGCGCGGCGAGTCCGCCGAAGCCCTGGCAGTGAAAGCGC
TGGACAAGCTGGAAACCCTGCTCCAGCACACCCAGGGCGACAATCCGGCGGACTTCGACTATGCCTTCAACCTCGACTAC
GGCCGTCGCTATACCGACCGCGCACCGCTGTTCAAGACCCTGCGCGAGTTACTCGACGCCAGGACCCGACAGCGCCTCGC
AGCTCGGCGCGACGCCTAG

Antitoxin


Download         Length: 172 a.a.        Molecular weight: 19284.81 Da        Isoelectric Point: 4.6424

>AT235703 WP_275130886.1 NZ_CP092106:254419-254934 [Vibrio sp. JC009]
MLKIVDLDWLSGYLLELEFSDGFKGIVDLEEVFNSEPYKQIQDFSAFSLEGTYLDWDGVELSANILRKMAAGKGHYTDRP
CVSASNMEDVLKQAAWDAIVSNRPDIFQAAIKGFVEEYGIQKIQQHTNLKSRPSIYKALSSNKSPKLDTLIQLGHAAFEL
EFESREISQKG

Download         Length: 516 bp

>AT235703 NZ_LR134330:5537198-5537752 [Pseudomonas aeruginosa]
ATGACCGAGCCTCTCCCTTCTTCGTCCCTGGGCCCCGCCCTGCGTCGCTGGCGCCTGCTGCACCGGGTCAAGCAAACGCA
TGCCGCCGAATTGCTCGGCGTGGCGCAATCGACCATCTCGCGCTGGGAGTCCGGTACCCAGGCGCTGCTGGTGGAGGAAC
GGGCACGCCTGGAGCGTCTGCTCGGCGCCCGCCTGGAAAGCGCCGCCGACCAGGCACTGGCCCGCCTGGTCGAGGCCAAC
CCGCAACCCGTGCACCTGATCTGCGACCTCACCCATCGCTTGCTGGCCTGTTCGCCGGCACGCGCCGCGCAATTCGGCGT
GCCCCTCGGCGAACTGCTCGACCGTTCGCTGTGGCCCTATTGCAGCGAGGAAATCCTCCGCCAGGAAGCCACCCTCGAGG
AACTCGGCTGGCGCGAACTGCTGGCACCGCCGGCGCTGGAGTTCGCCAGCGGAGCGAACGCCTCGGCCATCGTGCCGATC
CGGCGCAGCCGTTGCCGCTGGACCCGCATGACCCTCTCGGACGGACGCGCGGTGCGCCTGGTGGAAACCCTCTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References