Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | omega-epsilon-zeta/zeta-epsilon |
Location | 45059..45623 | Replicon | plasmid p1 |
Accession | NZ_CP091905 | ||
Organism | Enterococcus faecalis strain 43-2 |
Toxin (Protein)
Gene name | zeta | Uniprot ID | A0A0M2A908 |
Locus tag | L5I20_RS15075 | Protein ID | WP_010724880.1 |
Coordinates | 45333..45623 (+) | Length | 97 a.a. |
Antitoxin (Protein)
Gene name | epsilon | Uniprot ID | Q9AL01 |
Locus tag | L5I20_RS15070 | Protein ID | WP_002331065.1 |
Coordinates | 45059..45331 (+) | Length | 91 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
L5I20_RS15040 (40358) | 40358..41266 | + | 909 | WP_001255866.1 | aminoglycoside nucleotidyltransferase ANT(6)-Ia | - |
L5I20_RS15045 (41263) | 41263..41805 | + | 543 | WP_000627290.1 | streptothricin N-acetyltransferase Sat4 | - |
L5I20_RS15050 (41898) | 41898..42692 | + | 795 | WP_001096887.1 | aminoglycoside O-phosphotransferase APH(3')-IIIa | - |
L5I20_RS15055 (42968) | 42968..43540 | + | 573 | WP_001079938.1 | HTH domain-containing protein | - |
L5I20_RS15060 (43838) | 43838..44734 | + | 897 | WP_002334978.1 | AAA family ATPase | - |
L5I20_RS15065 (44833) | 44833..45042 | + | 210 | WP_000527318.1 | peptide-binding protein | - |
L5I20_RS15070 (45059) | 45059..45331 | + | 273 | WP_002331065.1 | antitoxin | Antitoxin |
L5I20_RS15075 (45333) | 45333..45623 | + | 291 | WP_010724880.1 | zeta toxin family protein | Toxin |
L5I20_RS15080 (45651) | 45651..46331 | + | 681 | WP_001015311.1 | IS6-like element IS1216 family transposase | - |
L5I20_RS15085 (46379) | 46379..46453 | - | 75 | Protein_50 | rRNA adenine methyltransferase | - |
L5I20_RS15090 (46458) | 46458..47195 | - | 738 | WP_002292226.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | - |
L5I20_RS15095 (47320) | 47320..47403 | - | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
L5I20_RS15100 (47526) | 47526..47693 | - | 168 | Protein_53 | peptide-binding protein | - |
L5I20_RS15105 (47827) | 47827..48087 | - | 261 | Protein_54 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
L5I20_RS15110 (48267) | 48267..48947 | + | 681 | WP_001015311.1 | IS6-like element IS1216 family transposase | - |
L5I20_RS15115 (48989) | 48989..49279 | + | 291 | WP_238461556.1 | hypothetical protein | - |
L5I20_RS15120 (49273) | 49273..49497 | + | 225 | WP_002406593.1 | ultraviolet resistance protein UvrA repressor UvrC | - |
L5I20_RS15125 (49558) | 49558..49767 | + | 210 | WP_010822384.1 | hypothetical protein | - |
L5I20_RS15130 (49779) | 49779..50081 | + | 303 | WP_002406176.1 | DUF6440 family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | ant(6)-Ia / aph(3')-III / erm(B) | cylR2 / cylL / cylS / cylM / cylB / cylA / cylI | 1..54858 | 54858 | |
- | inside | IScluster/Tn | ant(6)-Ia / aph(3')-III / erm(B) | - | 30868..48947 | 18079 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 97 a.a. Molecular weight: 10902.37 Da Isoelectric Point: 5.8599
>T235200 WP_010724880.1 NZ_CP091905:45333-45623 [Enterococcus faecalis]
MANITDFTEKQFEDRLEKNVERLTKNRLAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELV
KRFCCKVLNLLSNKVE
MANITDFTEKQFEDRLEKNVERLTKNRLAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELV
KRFCCKVLNLLSNKVE
Download Length: 291 bp
>T235200 NZ_LR134227:2233915-2234202 [Escherichia coli]
ATGGCGTATTTTCTGGATTTTGACGAGCGGGCACTAAAGGAATGGCGAAAGCTGGGCTCGACGGTACGTGAACAGTTGAA
AAAGAAGCTGGTTGAAGTACTTGAGTCACCCCGGATTGAAGCAAACAAGCTCCGTGGTATGCCTGATTGTTACAAGATTA
AGCTCCGGTCTTCAGGCTATCGCCTTGTATACCAGGTTATAGACGAGAAAGTTGTCGTTTTCGTGATTTCTGTTGGGAAA
AGAGAACGCTCGGAAGTATATAGCGAGGCGGTCAAACGCATTCTCTGA
ATGGCGTATTTTCTGGATTTTGACGAGCGGGCACTAAAGGAATGGCGAAAGCTGGGCTCGACGGTACGTGAACAGTTGAA
AAAGAAGCTGGTTGAAGTACTTGAGTCACCCCGGATTGAAGCAAACAAGCTCCGTGGTATGCCTGATTGTTACAAGATTA
AGCTCCGGTCTTCAGGCTATCGCCTTGTATACCAGGTTATAGACGAGAAAGTTGTCGTTTTCGTGATTTCTGTTGGGAAA
AGAGAACGCTCGGAAGTATATAGCGAGGCGGTCAAACGCATTCTCTGA
Antitoxin
Download Length: 91 a.a. Molecular weight: 10733.17 Da Isoelectric Point: 4.4865
>AT235200 WP_002331065.1 NZ_CP091905:45059-45331 [Enterococcus faecalis]
MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELDTKNTRLLEVNLLNQLEVAQEVDLFQQPFEELQAIHEYWRSMNQYS
KQILNKEKVA
MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELDTKNTRLLEVNLLNQLEVAQEVDLFQQPFEELQAIHEYWRSMNQYS
KQILNKEKVA
Download Length: 273 bp
>AT235200 NZ_LR134227:2233676-2233915 [Escherichia coli]
ATGGGTAGCATTAACCTGCGTATTGACGATGAACTTAAAGCGCGTTCTTACGCCGCGCTTGAAAAAATGGGTGTAACTCC
TTCTGAAGCGCTTCGTCTCATGCTCGAGTATATCGCTGACAATGAACGCTTGCCGTTCAAACAGACACTCCTGAGTGATG
AAGATGCTGAACTTGTGGAGATAGTGAAAGAACGGCTTCGTAATCCTAAGCCAGTACGTGTGACGCTGGATGAACTCTGA
ATGGGTAGCATTAACCTGCGTATTGACGATGAACTTAAAGCGCGTTCTTACGCCGCGCTTGAAAAAATGGGTGTAACTCC
TTCTGAAGCGCTTCGTCTCATGCTCGAGTATATCGCTGACAATGAACGCTTGCCGTTCAAACAGACACTCCTGAGTGATG
AAGATGCTGAACTTGTGGAGATAGTGAAAGAACGGCTTCGTAATCCTAAGCCAGTACGTGTGACGCTGGATGAACTCTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0M2A908 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A828ZL55 |