Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | rlegTA/AbiEii-AbiEi |
| Location | 249672..251163 | Replicon | chromosome |
| Accession | NZ_CP091785 | ||
| Organism | Brucella pseudogrignonensis strain ESL2 | ||
Toxin (Protein)
| Gene name | rlegT | Uniprot ID | - |
| Locus tag | L7D45_RS20770 | Protein ID | WP_113158968.1 |
| Coordinates | 249672..250550 (-) | Length | 293 a.a. |
Antitoxin (Protein)
| Gene name | rlegA | Uniprot ID | - |
| Locus tag | L7D45_RS20775 | Protein ID | WP_113158969.1 |
| Coordinates | 250543..251163 (-) | Length | 207 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L7D45_RS20745 (L7D45_20745) | 245369..245662 | + | 294 | WP_039861051.1 | (2Fe-2S)-binding protein | - |
| L7D45_RS20750 (L7D45_20750) | 245668..247152 | + | 1485 | WP_237854491.1 | FAD/NAD(P)-binding oxidoreductase | - |
| L7D45_RS20755 (L7D45_20755) | 247165..247509 | + | 345 | WP_007880491.1 | RidA family protein | - |
| L7D45_RS20765 (L7D45_20765) | 249409..249675 | - | 267 | WP_113158967.1 | helix-turn-helix domain-containing protein | - |
| L7D45_RS20770 (L7D45_20770) | 249672..250550 | - | 879 | WP_113158968.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
| L7D45_RS20775 (L7D45_20775) | 250543..251163 | - | 621 | WP_113158969.1 | AbiEi antitoxin N-terminal domain-containing protein | Antitoxin |
| L7D45_RS20780 (L7D45_20780) | 251796..252001 | - | 206 | Protein_234 | helix-turn-helix domain-containing protein | - |
| L7D45_RS20785 (L7D45_20785) | 251983..252776 | + | 794 | Protein_235 | IS30 family transposase | - |
| L7D45_RS20790 (L7D45_20790) | 253117..254001 | - | 885 | Protein_236 | recombinase family protein | - |
| L7D45_RS20795 (L7D45_20795) | 254027..254482 | - | 456 | WP_113158970.1 | PIN domain-containing protein | - |
| L7D45_RS20800 (L7D45_20800) | 254479..254724 | - | 246 | WP_113158974.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| L7D45_RS20805 (L7D45_20805) | 254799..255512 | - | 714 | WP_162733927.1 | LysR family substrate-binding domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | flank | IS/Tn | - | - | 255493..256479 | 986 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 293 a.a. Molecular weight: 32647.48 Da Isoelectric Point: 4.8176
>T234782 WP_113158968.1 NZ_CP091785:c250550-249672 [Brucella pseudogrignonensis]
MAKAPANTAKSIKDRLLNIARKESRAFDVLLVRFALERLLYRLSISAHRDCFVLKGGMLVTVWVADDNRVTRDADFLGQG
DADPARLIADFREIMAIESDDGLAFDIDALAATVIREEMEYGGVRLKTAAYLERTRIPITIDIGFGDAMADATQRLDYPT
LLDFPVPQVRSYPPATVIAEKFQAMLALGVLNGRMKDYYDLWAIPRAIDIPADDLDAAIRATFERRRTPIPKERPPGLSV
EMFGDEGKQRQWRAYAASLELDAVSLESIIERVWELVGPSCARIVARSENEA
MAKAPANTAKSIKDRLLNIARKESRAFDVLLVRFALERLLYRLSISAHRDCFVLKGGMLVTVWVADDNRVTRDADFLGQG
DADPARLIADFREIMAIESDDGLAFDIDALAATVIREEMEYGGVRLKTAAYLERTRIPITIDIGFGDAMADATQRLDYPT
LLDFPVPQVRSYPPATVIAEKFQAMLALGVLNGRMKDYYDLWAIPRAIDIPADDLDAAIRATFERRRTPIPKERPPGLSV
EMFGDEGKQRQWRAYAASLELDAVSLESIIERVWELVGPSCARIVARSENEA
Download Length: 879 bp
>T234782 NZ_LR134082:3669415-3669693 [Escherichia coli]
ATGATTCAAAGGGATATTGAATACTCGGGACAATATTCAAAGGATGTAAAACTTGCACAAAAGCGTCATAAGGATATGAA
TAAATTGAAATATCTTATGACGCTTCTTATCAATAATACTTTACCGCTTCCAGCTGTTTATAAAGACCACCCGCTGCAAG
GTTCATGGAAAGGTTATCGCGATGCTCATGTCGAACCGGACTGGATCCTGATTTACAAACTTACCGATAAACTTTTACGA
TTTGAGAGAACTGGAACTCACGCGGCGCTCTTTGGGTAA
ATGATTCAAAGGGATATTGAATACTCGGGACAATATTCAAAGGATGTAAAACTTGCACAAAAGCGTCATAAGGATATGAA
TAAATTGAAATATCTTATGACGCTTCTTATCAATAATACTTTACCGCTTCCAGCTGTTTATAAAGACCACCCGCTGCAAG
GTTCATGGAAAGGTTATCGCGATGCTCATGTCGAACCGGACTGGATCCTGATTTACAAACTTACCGATAAACTTTTACGA
TTTGAGAGAACTGGAACTCACGCGGCGCTCTTTGGGTAA
Antitoxin
Download Length: 207 a.a. Molecular weight: 22668.31 Da Isoelectric Point: 10.2528
>AT234782 WP_113158969.1 NZ_CP091785:c251163-250543 [Brucella pseudogrignonensis]
MLSAQDSQKAKLRSLLAARSMMHAHELREAGISAQTIARAVECGEIERISRGVYQKRDAEVQENQILAEAIMRAPKGVIA
LVSALAFHGLTDQMPRRVWIAIGTSDWAPVQSYPPLRMVRFTEPYLRQGIEHQVIAGIDVPVYSIPKTLADLFRNPKLVD
RSVAVEGLRAALQQRKATPSAIAQAAKAGGAWKVMQPYLEALTFNG
MLSAQDSQKAKLRSLLAARSMMHAHELREAGISAQTIARAVECGEIERISRGVYQKRDAEVQENQILAEAIMRAPKGVIA
LVSALAFHGLTDQMPRRVWIAIGTSDWAPVQSYPPLRMVRFTEPYLRQGIEHQVIAGIDVPVYSIPKTLADLFRNPKLVD
RSVAVEGLRAALQQRKATPSAIAQAAKAGGAWKVMQPYLEALTFNG
Download Length: 621 bp
>AT234782 NZ_LR134082:3669152-3669412 [Escherichia coli]
ATGGCTGCTAACGCGTTTGTTCGCGCCCGAATCGATGAAGATCTGAAGAATCAGGCAGCGGACGTACTGGCCGGGATGGG
GCTGACCATCTCTGACCTGGTTCGCATAACCCTCACAAAGGTCGCGCGTGAAAAGGCATTGCCGTTTGATTTACGCGAGC
CTAATCAATTAACCATTCAATCAATCAAAAACAGCGAAGCTGGCATTGATGTTCATAAGGCCAAAGACGCCGATGATTTA
TTTGATAAATTAGGAATTTAA
ATGGCTGCTAACGCGTTTGTTCGCGCCCGAATCGATGAAGATCTGAAGAATCAGGCAGCGGACGTACTGGCCGGGATGGG
GCTGACCATCTCTGACCTGGTTCGCATAACCCTCACAAAGGTCGCGCGTGAAAAGGCATTGCCGTTTGATTTACGCGAGC
CTAATCAATTAACCATTCAATCAATCAAAAACAGCGAAGCTGGCATTGATGTTCATAAGGCCAAAGACGCCGATGATTTA
TTTGATAAATTAGGAATTTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|
Antitoxin
| Source | ID | Structure |
|---|