Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | hicAB/HicA-HicB |
| Location | 2741685..2742336 | Replicon | chromosome |
| Accession | NZ_CP091365 | ||
| Organism | Acinetobacter baumannii strain AB172-VUB | ||
Toxin (Protein)
| Gene name | hicA | Uniprot ID | S3TWT7 |
| Locus tag | L2Z09_RS13115 | Protein ID | WP_000838146.1 |
| Coordinates | 2742154..2742336 (-) | Length | 61 a.a. |
Antitoxin (Protein)
| Gene name | hicB | Uniprot ID | A0A0J1AAF8 |
| Locus tag | L2Z09_RS13110 | Protein ID | WP_000966689.1 |
| Coordinates | 2741685..2742089 (-) | Length | 135 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Z09_RS13095 (L2Z09_13090) | 2736718..2737059 | - | 342 | WP_001281459.1 | phage tail protein | - |
| L2Z09_RS13100 (L2Z09_13095) | 2737177..2741142 | - | 3966 | WP_000191304.1 | tape measure protein | - |
| L2Z09_RS13105 (L2Z09_13100) | 2741203..2741604 | - | 402 | WP_000720591.1 | hypothetical protein | - |
| L2Z09_RS13110 (L2Z09_13105) | 2741685..2742089 | - | 405 | WP_000966689.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin |
| L2Z09_RS13115 (L2Z09_13110) | 2742154..2742336 | - | 183 | WP_000838146.1 | type II toxin-antitoxin system HicA family toxin | Toxin |
| L2Z09_RS13120 (L2Z09_13115) | 2742668..2743201 | - | 534 | WP_001185622.1 | hypothetical protein | - |
| L2Z09_RS13125 (L2Z09_13120) | 2743246..2744175 | - | 930 | WP_000094300.1 | phage tail tube protein | - |
| L2Z09_RS13130 (L2Z09_13125) | 2744283..2744495 | - | 213 | WP_000121166.1 | hypothetical protein | - |
| L2Z09_RS13135 (L2Z09_13130) | 2744497..2744895 | - | 399 | WP_001132270.1 | hypothetical protein | - |
| L2Z09_RS13140 (L2Z09_13135) | 2744897..2745265 | - | 369 | WP_000539752.1 | hypothetical protein | - |
| L2Z09_RS13145 (L2Z09_13140) | 2745237..2745641 | - | 405 | WP_000248324.1 | hypothetical protein | - |
| L2Z09_RS13150 (L2Z09_13145) | 2745650..2746018 | - | 369 | WP_000524231.1 | hypothetical protein | - |
| L2Z09_RS13155 (L2Z09_13150) | 2746020..2746409 | - | 390 | WP_000008492.1 | hypothetical protein | - |
| L2Z09_RS13160 (L2Z09_13155) | 2746414..2747079 | - | 666 | WP_000767881.1 | Ish1 domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 2718114..2780173 | 62059 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 61 a.a. Molecular weight: 6695.84 Da Isoelectric Point: 10.5523
>T233246 WP_000838146.1 NZ_CP091365:c2742336-2742154 [Acinetobacter baumannii]
VKSLDLIKMIEADGWYEVRVSGSHHHFKHPTKKGLVTIPHPKKDLPNGTVKSILKQAGLN
VKSLDLIKMIEADGWYEVRVSGSHHHFKHPTKKGLVTIPHPKKDLPNGTVKSILKQAGLN
Download Length: 183 bp
>T233246 NZ_HF571988:4444045-4444422 [Yersinia enterocolitica (type O:5) str. YE53/03]
ATGCAAACCCAACCACTATCCTCCACGCAGGAGGCTTCGTCACGTCCGACGCCCGTTGAAATCTGGCAGCAACTTCTTAT
ATATCTGCTGGAAAGACATTACGGCCTTTTGCTTCAAGACACACAGTTTGGTGATGGCAATGTGATTCAGCAGCATATTG
ATGCCGGGATTTCACTGGCAGATGCACTCAATTTTCTCGTTGAAAAATCTGAGCTGGTACGAATTGATCTCCCCGGTTTC
TCCATTCAGCATCAGTCTCAGTTCATCAGCGCTATTGACATACTCCGGGCCAGAAAGGTCACCGGCCTGATGCAACGTAC
CGGCTATAAAGCAGTGACTTGCGCCATCAGTGGACGCTCTTCCGGGGGGCAGCAATGA
ATGCAAACCCAACCACTATCCTCCACGCAGGAGGCTTCGTCACGTCCGACGCCCGTTGAAATCTGGCAGCAACTTCTTAT
ATATCTGCTGGAAAGACATTACGGCCTTTTGCTTCAAGACACACAGTTTGGTGATGGCAATGTGATTCAGCAGCATATTG
ATGCCGGGATTTCACTGGCAGATGCACTCAATTTTCTCGTTGAAAAATCTGAGCTGGTACGAATTGATCTCCCCGGTTTC
TCCATTCAGCATCAGTCTCAGTTCATCAGCGCTATTGACATACTCCGGGCCAGAAAGGTCACCGGCCTGATGCAACGTAC
CGGCTATAAAGCAGTGACTTGCGCCATCAGTGGACGCTCTTCCGGGGGGCAGCAATGA
Antitoxin
Download Length: 135 a.a. Molecular weight: 14769.78 Da Isoelectric Point: 4.5000
>AT233246 WP_000966689.1 NZ_CP091365:c2742089-2741685 [Acinetobacter baumannii]
MLYPIAIERGTDTEAFGVSVPDIPGCFSAGDTLYEAIENVKEAISGHLEILAEDGEEIPLASDVSKFIDQEDYRGMIWAV
TEVDVSRYLGKPEKINVTLPSRLIRKIDDNVGKDKRFKTRSAFLAAGAEKLLHA
MLYPIAIERGTDTEAFGVSVPDIPGCFSAGDTLYEAIENVKEAISGHLEILAEDGEEIPLASDVSKFIDQEDYRGMIWAV
TEVDVSRYLGKPEKINVTLPSRLIRKIDDNVGKDKRFKTRSAFLAAGAEKLLHA
Download Length: 405 bp
>AT233246 NZ_HF571988:4443664-4443993 [Yersinia enterocolitica (type O:5) str. YE53/03]
ATCGCTGAACCCTGGTGGGGGCTTAAACGCAGTATCACGCCCTGTTTTGGCGCTCGCCTGGTGCAGGAGAACAACCGGCT
GCACTATCTCGCTGACCGTGCCAGTATCACCGGACAGTTCAGCGACGCGGATTTACGCCATCTTGACCAGGCATTCCCGC
TGCTGTTGAAACAACTTGAACTGATGCTCACAAGTGATGAACTCACTCCACGCCATCAGCACTGTGTCACGTTATACGCA
AAAGGGCTGACCTGCGAGGCGGACAGCCTCGGCTCGCATGGATACGTGTACGTGGCGATTTACCCAACACCATCTGAAGC
AACCGCGTAA
ATCGCTGAACCCTGGTGGGGGCTTAAACGCAGTATCACGCCCTGTTTTGGCGCTCGCCTGGTGCAGGAGAACAACCGGCT
GCACTATCTCGCTGACCGTGCCAGTATCACCGGACAGTTCAGCGACGCGGATTTACGCCATCTTGACCAGGCATTCCCGC
TGCTGTTGAAACAACTTGAACTGATGCTCACAAGTGATGAACTCACTCCACGCCATCAGCACTGTGTCACGTTATACGCA
AAAGGGCTGACCTGCGAGGCGGACAGCCTCGGCTCGCATGGATACGTGTACGTGGCGATTTACCCAACACCATCTGAAGC
AACCGCGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | S3TWT7 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A0J1AAF8 |