Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mosAT/AbiEii-AbiEi |
| Location | 4596182..4597863 | Replicon | chromosome |
| Accession | NZ_CP091326 | ||
| Organism | Klebsiella pneumoniae strain hvK2115 | ||
Toxin (Protein)
| Gene name | mosT | Uniprot ID | J2XCI1 |
| Locus tag | L3Y29_RS22395 | Protein ID | WP_004146663.1 |
| Coordinates | 4596946..4597863 (+) | Length | 306 a.a. |
Antitoxin (Protein)
| Gene name | mosA | Uniprot ID | A6TH05 |
| Locus tag | L3Y29_RS22390 | Protein ID | WP_004177809.1 |
| Coordinates | 4596182..4596940 (+) | Length | 253 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L3Y29_RS22375 (4591800) | 4591800..4592486 | - | 687 | WP_004151733.1 | tetratricopeptide repeat protein | - |
| L3Y29_RS22380 (4592948) | 4592948..4595095 | - | 2148 | WP_012737173.1 | formate dehydrogenase H subunit alpha, selenocysteine-containing | - |
| L3Y29_RS22385 (4595368) | 4595368..4596096 | + | 729 | WP_004177810.1 | response regulator transcription factor | - |
| L3Y29_RS22390 (4596182) | 4596182..4596940 | + | 759 | WP_004177809.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin |
| L3Y29_RS22395 (4596946) | 4596946..4597863 | + | 918 | WP_004146663.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
| L3Y29_RS22400 (4597988) | 4597988..4598995 | - | 1008 | WP_004221949.1 | carbohydrate kinase family protein | - |
| L3Y29_RS22405 (4599070) | 4599070..4600011 | - | 942 | WP_002885156.1 | ABC transporter substrate-binding protein | - |
| L3Y29_RS22410 (4600042) | 4600042..4601040 | - | 999 | WP_004872882.1 | ribose ABC transporter permease | - |
| L3Y29_RS22415 (4601037) | 4601037..4602557 | - | 1521 | WP_002885173.1 | sugar ABC transporter ATP-binding protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 306 a.a. Molecular weight: 34659.10 Da Isoelectric Point: 5.4707
>T233156 WP_004146663.1 NZ_CP091326:4596946-4597863 [Klebsiella pneumoniae]
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
MDIQAPYYRQVALLMQVLPYVAVEREFALKGGTAINLFIRDFPRLSVDIDLAWVPLESRAIALPHIRDALARIAANLQQQ
AGMSAVLQANRSDEMRVIVTTDSAQIKIEVSPVARGTLYPPQEREVVGAVEDVFGYASLPVVSLPDLYGGKLCAALDRQH
PRDFYDVKLLLDAQELDRPIFNGFIAYLLSHNRPLAEVLNPRWKDIAEPFYREFSGMTFETIALEELTAVPNRMIAALKS
CFTQQDVDFLLSFKRGEPDWRLAPEMRIQDLPAVQWKLRNIHQMPAIKRAESLDKLEKVLAEWRS
Download Length: 918 bp
>T233156 NZ_CP128547:3545919-3546101 [Pseudomonas monteilii]
GTGCAAAGCAGGCAGTTGATCAAGGAGCTTGAAGCAGCTGGATGGGTTCTGAAACGTGTCACCGGAAGCCACCACATCTT
CAAGCACCCCAACAACCCAAACTCGATACCAGTGCCACACCCCAAAAAGGATCTACCAATCGGCACGGTAAAGAGCATCA
AGGAACGAGCCGGGTTGAAATAA
GTGCAAAGCAGGCAGTTGATCAAGGAGCTTGAAGCAGCTGGATGGGTTCTGAAACGTGTCACCGGAAGCCACCACATCTT
CAAGCACCCCAACAACCCAAACTCGATACCAGTGCCACACCCCAAAAAGGATCTACCAATCGGCACGGTAAAGAGCATCA
AGGAACGAGCCGGGTTGAAATAA
Antitoxin
Download Length: 253 a.a. Molecular weight: 28548.92 Da Isoelectric Point: 10.0870
>AT233156 WP_004177809.1 NZ_CP091326:4596182-4596940 [Klebsiella pneumoniae]
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPGTLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
MATKLNWLLQNSAPGDVILQSWLSQHAISPSLAFKYAQSGWLKKRGNGVYARAGREPEWNDALACLQNQLAAPVYVAGLS
SLVWQGRSHYLQLKQNQCWLSVENKALLPKWFREFPGVEWIVISGKKLPVLDDRYRVTLDIKGKKLIGSAPELAAYELLS
AVPGTLSFNHAAELFQGLVNLNPRKVEYLLSVSQSVQAKRLYLFFASFYEHGWLKRIDSQKIDLGAGKRQIVENGKFNAQ
YQITVPERFQKE
Download Length: 759 bp
>AT233156 NZ_CP128547:3546139-3546540 [Pseudomonas monteilii]
ATGCAATACCCAATCTGCATCGAATGGGGCGACGAGAACACCGCCACCGGCATCCAGATCCCTGATATTCCAGGCGCTGT
AACTGCGGGCGACACCTTCGAGGAGGCATATTCCTCCGCTGTCGAGGTCGCTCATATCATGCTGGAAGAGATCGCAAGCA
ACGGCCAGGCCATCCCAATGCCAACCAGCGCAGCAGCGCACCGAGGTAATCCTGACTTCGCTGATATGGGCTGGGGAATG
CTGGAAATCGACATCACCCCGTACCTGGGGAAAACCGAGAAGGTCAACGTTACCCTGCCGGGCTTTGTGATCCAGCAAAT
TGACCGGTACGTGCGAGATCACAACGTCAAGAGCCGTTCATCTTTCCTGGCTGATGCTGCCATGGAAAAGCTGGGCCGCT
GA
ATGCAATACCCAATCTGCATCGAATGGGGCGACGAGAACACCGCCACCGGCATCCAGATCCCTGATATTCCAGGCGCTGT
AACTGCGGGCGACACCTTCGAGGAGGCATATTCCTCCGCTGTCGAGGTCGCTCATATCATGCTGGAAGAGATCGCAAGCA
ACGGCCAGGCCATCCCAATGCCAACCAGCGCAGCAGCGCACCGAGGTAATCCTGACTTCGCTGATATGGGCTGGGGAATG
CTGGAAATCGACATCACCCCGTACCTGGGGAAAACCGAGAAGGTCAACGTTACCCTGCCGGGCTTTGTGATCCAGCAAAT
TGACCGGTACGTGCGAGATCACAACGTCAAGAGCCGTTCATCTTTCCTGGCTGATGCTGCCATGGAAAAGCTGGGCCGCT
GA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|