Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | kacAT/DUF1778(antitoxin) |
| Location | 2980698..2981495 | Replicon | chromosome |
| Accession | NZ_CP091081 | ||
| Organism | Enterobacter roggenkampii strain GD21SC1505 | ||
Toxin (Protein)
| Gene name | KacT | Uniprot ID | - |
| Locus tag | L1S38_RS14825 | Protein ID | WP_059361109.1 |
| Coordinates | 2980698..2981219 (-) | Length | 174 a.a. |
Antitoxin (Protein)
| Gene name | KacA | Uniprot ID | W7PG43 |
| Locus tag | L1S38_RS14830 | Protein ID | WP_008499829.1 |
| Coordinates | 2981226..2981495 (-) | Length | 90 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1S38_RS14795 (L1S38_14795) | 2976281..2976970 | + | 690 | WP_049122547.1 | pyrimidine utilization protein B | - |
| L1S38_RS14800 (L1S38_14800) | 2976982..2977368 | + | 387 | WP_008499822.1 | pyrimidine utilization protein C | - |
| L1S38_RS14805 (L1S38_14805) | 2977376..2978176 | + | 801 | WP_122008435.1 | pyrimidine utilization protein D | - |
| L1S38_RS14810 (L1S38_14810) | 2978186..2978776 | + | 591 | WP_250670049.1 | malonic semialdehyde reductase | - |
| L1S38_RS14815 (L1S38_14815) | 2978786..2979280 | + | 495 | WP_059361106.1 | pyrimidine utilization flavin reductase protein F | - |
| L1S38_RS14820 (L1S38_14820) | 2979302..2980624 | + | 1323 | WP_059361107.1 | pyrimidine utilization transport protein G | - |
| L1S38_RS14825 (L1S38_14825) | 2980698..2981219 | - | 522 | WP_059361109.1 | GNAT family N-acetyltransferase | Toxin |
| L1S38_RS14830 (L1S38_14830) | 2981226..2981495 | - | 270 | WP_008499829.1 | DUF1778 domain-containing protein | Antitoxin |
| L1S38_RS14835 (L1S38_14835) | 2981557..2982474 | - | 918 | WP_025912980.1 | DMT family transporter | - |
| L1S38_RS14840 (L1S38_14840) | 2982593..2982763 | - | 171 | WP_013097201.1 | general stress protein | - |
| L1S38_RS14845 (L1S38_14845) | 2983155..2983751 | + | 597 | WP_008499831.1 | NAD(P)H:quinone oxidoreductase | - |
| L1S38_RS14850 (L1S38_14850) | 2983770..2983997 | + | 228 | WP_028012649.1 | YccJ family protein | - |
| L1S38_RS14855 (L1S38_14855) | 2984093..2984770 | - | 678 | Protein_2913 | contractile injection system protein, VgrG/Pvc8 family | - |
| L1S38_RS14860 (L1S38_14860) | 2984771..2985088 | - | 318 | WP_242458938.1 | Imm52 family immunity protein | - |
| L1S38_RS14865 (L1S38_14865) | 2985482..2985772 | - | 291 | WP_250670677.1 | Tox-REase-5 domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | flank | IS/Tn | - | - | 2985822..2986790 | 968 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 174 a.a. Molecular weight: 19671.43 Da Isoelectric Point: 6.7517
>T232710 WP_059361109.1 NZ_CP091081:c2981219-2980698 [Enterobacter roggenkampii]
VDNLTIEMFSEGKDYDFSDFDCGEPSLNVFLTEHLVRQHNGRILRGYLLKDRDGPRVLGYYTLSGSCFEKAMLPSKTQQR
RIPYSNVPSVTLGRLAIHKDLQGLEWGTTLVTHAMRVVYLALQAVGVHGIFVDALNDQAKQFYLKQGFIPLTDENSHSLF
FPTKSIERLFEQA
VDNLTIEMFSEGKDYDFSDFDCGEPSLNVFLTEHLVRQHNGRILRGYLLKDRDGPRVLGYYTLSGSCFEKAMLPSKTQQR
RIPYSNVPSVTLGRLAIHKDLQGLEWGTTLVTHAMRVVYLALQAVGVHGIFVDALNDQAKQFYLKQGFIPLTDENSHSLF
FPTKSIERLFEQA
Download Length: 522 bp
>T232710 NZ_CP128152:2372597-2373334 [Bacillus albus]
GTGATCTCTAACATTCGAATCGGCTTATTTATTTTAGCAATCGTTTTTCTAGTTCTTGTTTTCTTTTACTGGAGAAATGA
AGAGTTGTACGAAGAGAAGAAGCAACGGATTAGAAAGACTTGGTATGGGTTATTTATAGTATCAGTCACCGTGTATTTCA
TGATAAAAGGAATTGATTTAACCCTCTGGAAAAATCTTTTAATGTTCACTGCAATGGTTATTTTCGTTGATATTGCATTT
ATTTTAACACCTAATATTTCAGAAATATGGGGAGCGAAATTTAGCGATATCGGCAAGACTGTTCAATCGATAAAAAGATC
ATTAATTGCTTCTAAAGCAAGAGGAGAAATATACACAACAATTATTCAAAATGTGAATCCAGCAGTATTCGGTACGATGG
AATGGCATACGGAAGAAGACTATACAAAAAGTTTAAACGCATTTTTAGATTCATACGGGGAAAAGATTGGAGCGAAAATT
GTTGTATTTGAATCGGCAAAGGAATTAAATACAAACTTTCGCGGTATCCGCTCGCAATTTAGTACTATCGTTCCATTTGA
ACACATTGAGCAATTGAATGAGCAGAAAGCGGTGCAAGTAGAAAATGTCGGAATTATACCAGTAAAAATAGTGAGTGATG
TTTTCATTGTTATTGATGGGAAGAAAAATAATCTGCAAGATCGGGATTTTGAAAATGTATATAATTTAACAATACATCAT
AGTTACTTTAGTAAATAA
GTGATCTCTAACATTCGAATCGGCTTATTTATTTTAGCAATCGTTTTTCTAGTTCTTGTTTTCTTTTACTGGAGAAATGA
AGAGTTGTACGAAGAGAAGAAGCAACGGATTAGAAAGACTTGGTATGGGTTATTTATAGTATCAGTCACCGTGTATTTCA
TGATAAAAGGAATTGATTTAACCCTCTGGAAAAATCTTTTAATGTTCACTGCAATGGTTATTTTCGTTGATATTGCATTT
ATTTTAACACCTAATATTTCAGAAATATGGGGAGCGAAATTTAGCGATATCGGCAAGACTGTTCAATCGATAAAAAGATC
ATTAATTGCTTCTAAAGCAAGAGGAGAAATATACACAACAATTATTCAAAATGTGAATCCAGCAGTATTCGGTACGATGG
AATGGCATACGGAAGAAGACTATACAAAAAGTTTAAACGCATTTTTAGATTCATACGGGGAAAAGATTGGAGCGAAAATT
GTTGTATTTGAATCGGCAAAGGAATTAAATACAAACTTTCGCGGTATCCGCTCGCAATTTAGTACTATCGTTCCATTTGA
ACACATTGAGCAATTGAATGAGCAGAAAGCGGTGCAAGTAGAAAATGTCGGAATTATACCAGTAAAAATAGTGAGTGATG
TTTTCATTGTTATTGATGGGAAGAAAAATAATCTGCAAGATCGGGATTTTGAAAATGTATATAATTTAACAATACATCAT
AGTTACTTTAGTAAATAA
Antitoxin
Download Length: 90 a.a. Molecular weight: 10262.72 Da Isoelectric Point: 5.8836
>AT232710 WP_008499829.1 NZ_CP091081:c2981495-2981226 [Enterobacter roggenkampii]
MPALKKQRIDLRLTDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNEASWNAVMDAIDNPPEPNERLKR
AAKRLRNME
MPALKKQRIDLRLTDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNEASWNAVMDAIDNPPEPNERLKR
AAKRLRNME
Download Length: 270 bp
>AT232710 NZ_CP128152:2373447-2373572 [Bacillus albus]
GTGATAAAAGATTATGACAATGATTTTTTTAAAGAAGATAATGAAGATGCAACAGATTTCTCGTTAATAAAAGGAGATAC
ATTACAGCAAGTAGAAGAATTAGAAGAAGAATTAAAAAGAAAATGA
GTGATAAAAGATTATGACAATGATTTTTTTAAAGAAGATAATGAAGATGCAACAGATTTCTCGTTAATAAAAGGAGATAC
ATTACAGCAAGTAGAAGAATTAGAAGAAGAATTAAAAAGAAAATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|