Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | phd-doc/HTH_IclR(antitoxin) |
| Location | 1428096..1429843 | Replicon | chromosome |
| Accession | NZ_CP090781 | ||
| Organism | Burkholderia multivorans strain 2004Ycf1069VI | ||
Toxin (Protein)
| Gene name | doc | Uniprot ID | B9BHC0 |
| Locus tag | L0Y94_RS08710 | Protein ID | WP_006403210.1 |
| Coordinates | 1428947..1429843 (-) | Length | 299 a.a. |
Antitoxin (Protein)
| Gene name | phd | Uniprot ID | B9AZJ2 |
| Locus tag | L0Y94_RS08705 | Protein ID | WP_006396780.1 |
| Coordinates | 1428096..1428950 (-) | Length | 285 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y94_RS08685 (L0Y94_08685) | 1423267..1424757 | - | 1491 | WP_006403213.1 | aldehyde dehydrogenase | - |
| L0Y94_RS08690 (L0Y94_08690) | 1424819..1425649 | - | 831 | WP_006403212.1 | aspartate dehydrogenase | - |
| L0Y94_RS08695 (L0Y94_08695) | 1425642..1427309 | - | 1668 | WP_006403211.1 | thiamine pyrophosphate-binding protein | - |
| L0Y94_RS08700 (L0Y94_08700) | 1427302..1428099 | - | 798 | WP_006409174.1 | SDR family oxidoreductase | - |
| L0Y94_RS08705 (L0Y94_08705) | 1428096..1428950 | - | 855 | WP_006396780.1 | IclR family transcriptional regulator | Antitoxin |
| L0Y94_RS08710 (L0Y94_08710) | 1428947..1429843 | - | 897 | WP_006403210.1 | alpha/beta fold hydrolase | Toxin |
| L0Y94_RS08715 (L0Y94_08715) | 1429862..1430389 | - | 528 | WP_006396778.1 | cupin domain-containing protein | - |
| L0Y94_RS08720 (L0Y94_08720) | 1430417..1431187 | - | 771 | WP_006408452.1 | SDR family oxidoreductase | - |
| L0Y94_RS08725 (L0Y94_08725) | 1431180..1432250 | - | 1071 | WP_006403208.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| L0Y94_RS08730 (L0Y94_08730) | 1432298..1432609 | - | 312 | WP_006403207.1 | hypothetical protein | - |
| L0Y94_RS08735 (L0Y94_08735) | 1432611..1432928 | - | 318 | WP_006396774.1 | non-heme iron oxygenase ferredoxin subunit | - |
| L0Y94_RS08740 (L0Y94_08740) | 1433365..1434444 | + | 1080 | WP_006409825.1 | porin | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 299 a.a. Molecular weight: 30544.80 Da Isoelectric Point: 8.0446
>T231883 WP_006403210.1 NZ_CP090781:c1429843-1428947 [Burkholderia multivorans]
MSVVDKRERDRTAAFATLLERFPEQRCAAGAAGTIGYREAGAQQAGAALPVVLLHGIGSGAASWVRQLDALGASRRVLAW
DAPGYGASTPVHGASPSAVDYAASLDAWLDALGIARCVLVGHSLGAIVAGGMVRVKPERIAGLLLISPAGGYGSAPAETR
ASRRDARLAMLAELGPAGLAAQRSGNMLSGFATEDARAWVRWNMARIVPAGYAQATHLLANADLAADLAGFRGRTAVAVG
ANDAITPPAACERIAAAAGVGLQVIPQAGHAGYVEAPDVYSALIDAFCRQCDIERRAA
MSVVDKRERDRTAAFATLLERFPEQRCAAGAAGTIGYREAGAQQAGAALPVVLLHGIGSGAASWVRQLDALGASRRVLAW
DAPGYGASTPVHGASPSAVDYAASLDAWLDALGIARCVLVGHSLGAIVAGGMVRVKPERIAGLLLISPAGGYGSAPAETR
ASRRDARLAMLAELGPAGLAAQRSGNMLSGFATEDARAWVRWNMARIVPAGYAQATHLLANADLAADLAGFRGRTAVAVG
ANDAITPPAACERIAAAAGVGLQVIPQAGHAGYVEAPDVYSALIDAFCRQCDIERRAA
Download Length: 897 bp
>T231883 NZ_CP126980:c9007310-9007029 [Actinoplanes sp. NRRL 3884]
GTGATCCGATCCTTCGGAAACCGGGAGACCGAGAGGCTTTGGCAACGCGAGCACGTCAGGTCGCTCGACACCCGGGTCCT
CCGGACGGCGTTGCGCAAGCTCGCGCTGCTCGACGCTGCGATGGCCCTGGCCGATCTACGAGTTCCGCCAGGCAATCGGT
TGGAAGCGCTCAGCGGCGACCGCAAAGGTCAGCACAGCATTCGGATCAATGACCAGTGGCGGATCTGCTTCGTCTGGACC
GAGACCGGTCCAGAAGACGTGGAGATCGTGGACTACCACTAG
GTGATCCGATCCTTCGGAAACCGGGAGACCGAGAGGCTTTGGCAACGCGAGCACGTCAGGTCGCTCGACACCCGGGTCCT
CCGGACGGCGTTGCGCAAGCTCGCGCTGCTCGACGCTGCGATGGCCCTGGCCGATCTACGAGTTCCGCCAGGCAATCGGT
TGGAAGCGCTCAGCGGCGACCGCAAAGGTCAGCACAGCATTCGGATCAATGACCAGTGGCGGATCTGCTTCGTCTGGACC
GAGACCGGTCCAGAAGACGTGGAGATCGTGGACTACCACTAG
Antitoxin
Download Length: 285 a.a. Molecular weight: 31176.75 Da Isoelectric Point: 6.6558
>AT231883 WP_006396780.1 NZ_CP090781:c1428950-1428096 [Burkholderia multivorans]
MSEPLQSAAEPAKAEASYVVPGLERGLRILAEFSPREPVLGAPELSKRLGIPRTTVFRLLQTLESLGFLERADKDRNYKL
GIAVLRLGFEYLSSLELTDLGLPVIESLRDATGFTTHIVIRDGRDVVFVAKAQSEAPVFSSIRVNVGTRLPAHATTHGHV
LMGDLSLDELRALYPEGTLPRMTNATPDTVDALYTMIREDALRGYGISNSSFERGISVVTAPVRNDTQKIVACITVTVPR
PEIDATLIADGLIDKVRRAAAELSRRLNYRSDDEHTFLKALGLR
MSEPLQSAAEPAKAEASYVVPGLERGLRILAEFSPREPVLGAPELSKRLGIPRTTVFRLLQTLESLGFLERADKDRNYKL
GIAVLRLGFEYLSSLELTDLGLPVIESLRDATGFTTHIVIRDGRDVVFVAKAQSEAPVFSSIRVNVGTRLPAHATTHGHV
LMGDLSLDELRALYPEGTLPRMTNATPDTVDALYTMIREDALRGYGISNSSFERGISVVTAPVRNDTQKIVACITVTVPR
PEIDATLIADGLIDKVRRAAAELSRRLNYRSDDEHTFLKALGLR
Download Length: 855 bp
>AT231883 NZ_CP126980:c9007015-9006722 [Actinoplanes sp. NRRL 3884]
GTGACCAAGCTAGCTCCCATCCACCCCGGCGAGGTGCTGATGGAGGACTTCATCACCCCGCTCGGAATCACCCAGCACAA
GGTTGCCGTCGCCATTGGTGTGCCGCCACGGCGGATCAACGAGATCGTCCACGGAAAGCGGCGCATCTCGGCCGATACCG
CTCTTCGTCTCTCGCGCTACTTCGGCACGACGGATCTGTTCTGGATCAATCTGCAGAACCGTTACGACCTCGAAGTCGAG
AAGGACGCCCTCGGCGACTCCCTCGACAGCATCCGGCCGCTTCAATCGGCGTGA
GTGACCAAGCTAGCTCCCATCCACCCCGGCGAGGTGCTGATGGAGGACTTCATCACCCCGCTCGGAATCACCCAGCACAA
GGTTGCCGTCGCCATTGGTGTGCCGCCACGGCGGATCAACGAGATCGTCCACGGAAAGCGGCGCATCTCGGCCGATACCG
CTCTTCGTCTCTCGCGCTACTTCGGCACGACGGATCTGTTCTGGATCAATCTGCAGAACCGTTACGACCTCGAAGTCGAG
AAGGACGCCCTCGGCGACTCCCTCGACAGCATCCGGCCGCTTCAATCGGCGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|