Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/upstrm_HI1419-dnstrm_HI1420 |
Location | 1369197..1369778 | Replicon | chromosome |
Accession | NZ_CP090687 | ||
Organism | Burkholderia multivorans strain 2019Y60005016V |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | L0Y84_RS19030 | Protein ID | WP_035946056.1 |
Coordinates | 1369485..1369778 (-) | Length | 98 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | J4SGI3 |
Locus tag | L0Y84_RS19025 | Protein ID | WP_006409266.1 |
Coordinates | 1369197..1369481 (-) | Length | 95 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
L0Y84_RS19000 (L0Y84_19000) | 1364845..1366266 | - | 1422 | WP_043279886.1 | FAD-binding oxidoreductase | - |
L0Y84_RS19005 (L0Y84_19005) | 1366285..1366680 | - | 396 | WP_006404970.1 | DUF2069 domain-containing protein | - |
L0Y84_RS19010 (L0Y84_19010) | 1366677..1367288 | - | 612 | WP_006402099.1 | NAD(P)H:quinone oxidoreductase | - |
L0Y84_RS19015 (L0Y84_19015) | 1367433..1368761 | + | 1329 | WP_045594112.1 | YihY family inner membrane protein | - |
L0Y84_RS19020 (L0Y84_19020) | 1368925..1369113 | - | 189 | WP_006409259.1 | hypothetical protein | - |
L0Y84_RS19025 (L0Y84_19025) | 1369197..1369481 | - | 285 | WP_006409266.1 | putative addiction module antidote protein | Antitoxin |
L0Y84_RS19030 (L0Y84_19030) | 1369485..1369778 | - | 294 | WP_035946056.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
L0Y84_RS19035 (L0Y84_19035) | 1370004..1370321 | - | 318 | WP_006402097.1 | DUF962 domain-containing protein | - |
L0Y84_RS19040 (L0Y84_19040) | 1370482..1370937 | + | 456 | WP_006402096.1 | CBS domain-containing protein | - |
L0Y84_RS19045 (L0Y84_19045) | 1371086..1373020 | + | 1935 | WP_006404968.1 | MFS transporter | - |
L0Y84_RS19050 (L0Y84_19050) | 1373189..1374289 | + | 1101 | WP_006404967.1 | chorismate synthase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 98 a.a. Molecular weight: 11168.92 Da Isoelectric Point: 9.4615
>T231626 WP_035946056.1 NZ_CP090687:c1369778-1369485 [Burkholderia multivorans]
MVTLLRSTEFNDWLANLRDQRGKARIAARLISAQLGNFGEYRVLDEGVCELKIDFGPGYRVYYVRRGEVVYLLLCGGDKS
TQRKDIKPVQMARELKE
MVTLLRSTEFNDWLANLRDQRGKARIAARLISAQLGNFGEYRVLDEGVCELKIDFGPGYRVYYVRRGEVVYLLLCGGDKS
TQRKDIKPVQMARELKE
Download Length: 294 bp
>T231626 NZ_CP126937:1983787-1984038 [Escherichia coli O2:K1:H4]
ATGCGTACAATTAGCTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGAT
CCTTATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATC
TACTGCGCTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGGCAAAGGAACGGAAAAGGAC
ATTATTGAGTGA
ATGCGTACAATTAGCTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGAT
CCTTATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATC
TACTGCGCTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGGCAAAGGAACGGAAAAGGAC
ATTATTGAGTGA
Antitoxin
Download Length: 95 a.a. Molecular weight: 9986.38 Da Isoelectric Point: 6.2121
>AT231626 WP_006409266.1 NZ_CP090687:c1369481-1369197 [Burkholderia multivorans]
MTNYTEFDAADYLDNDEAVAEFLAVAAEDPNPDVFLAAVAAVARARGMTKVAAAAGVGRVALHKALTPGAHPRYETVQKI
IRSLGLRMSFTVAH
MTNYTEFDAADYLDNDEAVAEFLAVAAEDPNPDVFLAAVAAVARARGMTKVAAAAGVGRVALHKALTPGAHPRYETVQKI
IRSLGLRMSFTVAH
Download Length: 285 bp
>AT231626 NZ_CP126937:1984035-1984289 [Escherichia coli O2:K1:H4]
GTGAAACTAATCTGGTCTGAGGAGTCATGGGATGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACACCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA
GTGAAACTAATCTGGTCTGAGGAGTCATGGGATGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACACCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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