Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) relBE/upstrm_HI1419-dnstrm_HI1420
Location 1369197..1369778 Replicon chromosome
Accession NZ_CP090687
Organism Burkholderia multivorans strain 2019Y60005016V

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag L0Y84_RS19030 Protein ID WP_035946056.1
Coordinates 1369485..1369778 (-) Length 98 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID J4SGI3
Locus tag L0Y84_RS19025 Protein ID WP_006409266.1
Coordinates 1369197..1369481 (-) Length 95 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
L0Y84_RS19000 (L0Y84_19000) 1364845..1366266 - 1422 WP_043279886.1 FAD-binding oxidoreductase -
L0Y84_RS19005 (L0Y84_19005) 1366285..1366680 - 396 WP_006404970.1 DUF2069 domain-containing protein -
L0Y84_RS19010 (L0Y84_19010) 1366677..1367288 - 612 WP_006402099.1 NAD(P)H:quinone oxidoreductase -
L0Y84_RS19015 (L0Y84_19015) 1367433..1368761 + 1329 WP_045594112.1 YihY family inner membrane protein -
L0Y84_RS19020 (L0Y84_19020) 1368925..1369113 - 189 WP_006409259.1 hypothetical protein -
L0Y84_RS19025 (L0Y84_19025) 1369197..1369481 - 285 WP_006409266.1 putative addiction module antidote protein Antitoxin
L0Y84_RS19030 (L0Y84_19030) 1369485..1369778 - 294 WP_035946056.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
L0Y84_RS19035 (L0Y84_19035) 1370004..1370321 - 318 WP_006402097.1 DUF962 domain-containing protein -
L0Y84_RS19040 (L0Y84_19040) 1370482..1370937 + 456 WP_006402096.1 CBS domain-containing protein -
L0Y84_RS19045 (L0Y84_19045) 1371086..1373020 + 1935 WP_006404968.1 MFS transporter -
L0Y84_RS19050 (L0Y84_19050) 1373189..1374289 + 1101 WP_006404967.1 chorismate synthase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.



Sequences


Toxin        


Download         Length: 98 a.a.        Molecular weight: 11168.92 Da        Isoelectric Point: 9.4615

>T231626 WP_035946056.1 NZ_CP090687:c1369778-1369485 [Burkholderia multivorans]
MVTLLRSTEFNDWLANLRDQRGKARIAARLISAQLGNFGEYRVLDEGVCELKIDFGPGYRVYYVRRGEVVYLLLCGGDKS
TQRKDIKPVQMARELKE

Download         Length: 294 bp

>T231626 NZ_CP126937:1983787-1984038 [Escherichia coli O2:K1:H4]
ATGCGTACAATTAGCTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGAT
CCTTATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATC
TACTGCGCTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGGCAAAGGAACGGAAAAGGAC
ATTATTGAGTGA

Antitoxin


Download         Length: 95 a.a.        Molecular weight: 9986.38 Da        Isoelectric Point: 6.2121

>AT231626 WP_006409266.1 NZ_CP090687:c1369481-1369197 [Burkholderia multivorans]
MTNYTEFDAADYLDNDEAVAEFLAVAAEDPNPDVFLAAVAAVARARGMTKVAAAAGVGRVALHKALTPGAHPRYETVQKI
IRSLGLRMSFTVAH

Download         Length: 285 bp

>AT231626 NZ_CP126937:1984035-1984289 [Escherichia coli O2:K1:H4]
GTGAAACTAATCTGGTCTGAGGAGTCATGGGATGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACACCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure
AlphaFold DB J4SGI3

References