Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) rlegTA/AbiEii-AbiEi
Location 192902..194418 Replicon plasmid unnamed
Accession NC_011143
Organism Phenylobacterium zucineum HLK1

Toxin (Protein)


Gene name rlegT Uniprot ID -
Locus tag PHZ_RS20470 Protein ID WP_148217032.1
Coordinates 192902..193810 (-) Length 303 a.a.

Antitoxin (Protein)


Gene name rlegA Uniprot ID -
Locus tag PHZ_RS20475 Protein ID WP_148217033.1
Coordinates 193807..194418 (-) Length 204 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
PHZ_RS20450 188329..189973 - 1645 Protein_192 long-chain-fatty-acid--CoA ligase -
PHZ_RS20455 190053..190436 - 384 WP_148217031.1 AAA family ATPase -
PHZ_RS20460 190714..191973 - 1260 WP_012520409.1 three-Cys-motif partner protein TcmP -
PHZ_RS20465 192011..192787 - 777 WP_012520410.1 phage Gp37/Gp68 family protein -
PHZ_RS20470 192902..193810 - 909 WP_148217032.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
PHZ_RS20475 193807..194418 - 612 WP_148217033.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein Antitoxin

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..382976 382976


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(38-266)

Antitoxin

Transcriptional regulator, AbiEi antitoxin

(9-55)


Sequences

Toxin        


Download         Length: 303 a.a.        Molecular weight: 33300.37 Da        Isoelectric Point: 4.9300

>T23031 WP_148217032.1 NC_011143:c193810-192902 [Phenylobacterium zucineum HLK1]
VNDKPKDMAVSARARLTNRARERKENAQLLMTRYVIERLLWRLSVSPYRQLFVLKGAMLFSLWAPTPYRATGDLDLLGFG
NNDPDQVAGLFRELMVIPGDDGIVFKPDTIVAAAARAEDEYSGVRLDFQAELAGARLPIHVDIGFGDAITPGAQDIEYPS
LLDLPPPKLRAYPPETVVAEKFQAMTALGMVNSRMKDFFDLWAIANTFAFEGAVLAQAIAATFARRETPLPKEPPLALTA
GFAEAKQAQWTAFLKRTEISLAPEPFPEIQAQIVELVMAPTLRIADGETFAGRWPPGGVWTT

Download         Length: 909 bp

>T23031 NC_011143:c193810-192902 [Phenylobacterium zucineum HLK1]
GTGAATGACAAGCCCAAGGACATGGCCGTCTCGGCTCGCGCCCGGCTGACCAACCGGGCCCGCGAGCGGAAGGAGAACGC
CCAGCTCCTGATGACCCGCTACGTCATCGAGCGGCTCCTGTGGCGCCTCAGCGTCTCGCCCTACCGGCAGCTCTTCGTGC
TCAAAGGCGCCATGCTCTTCAGCCTCTGGGCGCCCACGCCATACCGCGCCACTGGGGACCTGGACCTCCTGGGTTTCGGC
AACAACGACCCCGATCAGGTCGCGGGTCTGTTCCGAGAGTTGATGGTGATCCCAGGGGACGACGGGATCGTCTTCAAACC
GGACACCATCGTGGCGGCGGCCGCGCGCGCCGAGGACGAGTACAGCGGGGTTCGCCTCGACTTCCAGGCCGAACTCGCCG
GCGCTCGGCTCCCGATCCATGTGGACATCGGTTTCGGCGACGCCATCACGCCGGGCGCACAGGACATCGAGTATCCGTCC
CTGCTCGATCTGCCGCCGCCAAAGCTCCGCGCCTACCCGCCGGAGACGGTGGTGGCGGAGAAGTTCCAGGCGATGACCGC
GCTTGGAATGGTCAACTCGCGCATGAAGGACTTCTTCGATCTCTGGGCCATCGCCAACACCTTCGCCTTCGAGGGGGCGG
TCCTGGCCCAGGCTATCGCCGCGACGTTCGCACGCCGAGAGACGCCGCTGCCGAAAGAGCCACCGCTCGCCCTCACCGCT
GGCTTCGCGGAAGCCAAGCAGGCCCAGTGGACCGCCTTTCTGAAGCGGACGGAGATTTCGCTGGCGCCCGAGCCCTTCCC
CGAGATTCAGGCCCAGATCGTTGAACTCGTGATGGCGCCGACGCTCCGCATCGCGGATGGCGAGACCTTCGCGGGCCGTT
GGCCGCCGGGTGGCGTCTGGACCACGTGA

Antitoxin


Download         Length: 204 a.a.        Molecular weight: 22694.15 Da        Isoelectric Point: 10.0131

>AT23031 WP_148217033.1 NC_011143:c194418-193807 [Phenylobacterium zucineum HLK1]
MEPRGHRQRAIEVARAQGIARGSDFDAAGVPRMYLKRLTEDGVLLQVGRGLYRLADSPSDAASSLAEAVRIQPRGVIGLL
SALQYHDLTTQTPHAVWMLLGPKDWAPTSAPVQIRVIRASGRALREGVERHEIDQVPVPITSPAKTVVDCFKYRNKIGLD
VAVEGLRDLMRRPDRRPAIDELWRFAEIDRVQTVMRPYLEALT

Download         Length: 612 bp

>AT23031 NC_011143:c194418-193807 [Phenylobacterium zucineum HLK1]
ATGGAACCCAGAGGTCACCGCCAACGCGCCATCGAGGTCGCCCGCGCGCAAGGGATCGCTCGCGGATCGGACTTCGACGC
GGCCGGCGTGCCCCGGATGTATCTCAAGCGCCTCACGGAAGACGGCGTGCTGCTGCAGGTCGGACGCGGACTCTATCGCC
TGGCCGACTCCCCCTCCGACGCGGCCTCAAGCCTGGCCGAGGCCGTCCGGATCCAACCCCGCGGCGTGATCGGCCTGCTC
TCGGCCCTGCAGTACCATGACCTCACCACCCAGACGCCCCACGCGGTCTGGATGCTGCTCGGCCCCAAGGACTGGGCGCC
CACCAGCGCGCCCGTACAGATCCGGGTGATCCGCGCCAGCGGCCGCGCGCTTCGCGAAGGCGTCGAGCGTCACGAGATTG
ACCAGGTGCCGGTGCCGATCACCTCGCCCGCTAAGACGGTGGTCGACTGCTTCAAGTACCGAAACAAGATCGGCCTCGAC
GTGGCCGTGGAGGGGCTGCGCGACCTCATGCGGCGTCCTGATCGCAGACCGGCCATCGACGAGCTTTGGCGGTTCGCGGA
GATCGACCGGGTCCAAACCGTGATGCGCCCCTACCTCGAGGCGCTCACGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References