Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | kacAT/DUF1778(antitoxin) |
| Location | 1716072..1716869 | Replicon | chromosome |
| Accession | NZ_CP088229 | ||
| Organism | Enterobacter kobei strain Ek72 | ||
Toxin (Protein)
| Gene name | KacT | Uniprot ID | - |
| Locus tag | LK774_RS08175 | Protein ID | WP_176450254.1 |
| Coordinates | 1716345..1716869 (+) | Length | 175 a.a. |
Antitoxin (Protein)
| Gene name | KacA | Uniprot ID | A0A2W0G3H3 |
| Locus tag | LK774_RS08170 | Protein ID | WP_014883303.1 |
| Coordinates | 1716072..1716341 (+) | Length | 90 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LK774_RS08140 (LK774_08150) | 1711693..1712193 | + | 501 | WP_014883299.1 | DedA family protein | - |
| LK774_RS08145 (LK774_08155) | 1712297..1713538 | + | 1242 | WP_023332655.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| LK774_RS08150 (LK774_08160) | 1713572..1713799 | - | 228 | WP_014883300.1 | YccJ family protein | - |
| LK774_RS08155 (LK774_08165) | 1713818..1714414 | - | 597 | WP_014883301.1 | NAD(P)H:quinone oxidoreductase | - |
| LK774_RS08160 (LK774_08170) | 1714806..1714976 | + | 171 | WP_023332656.1 | general stress protein | - |
| LK774_RS08165 (LK774_08175) | 1715093..1716010 | + | 918 | WP_023332657.1 | DMT family transporter | - |
| LK774_RS08170 (LK774_08180) | 1716072..1716341 | + | 270 | WP_014883303.1 | DUF1778 domain-containing protein | Antitoxin |
| LK774_RS08175 (LK774_08185) | 1716345..1716869 | + | 525 | WP_176450254.1 | GNAT family N-acetyltransferase | Toxin |
| LK774_RS08180 (LK774_08190) | 1716943..1718265 | - | 1323 | WP_014883305.1 | pyrimidine utilization transport protein G | - |
| LK774_RS08185 (LK774_08195) | 1718287..1718781 | - | 495 | WP_023332659.1 | pyrimidine utilization flavin reductase protein F | - |
| LK774_RS08190 (LK774_08200) | 1718791..1719381 | - | 591 | WP_014883307.1 | malonic semialdehyde reductase | - |
| LK774_RS08195 (LK774_08205) | 1719391..1720191 | - | 801 | WP_023332660.1 | pyrimidine utilization protein D | - |
| LK774_RS08200 (LK774_08210) | 1720199..1720585 | - | 387 | WP_023332661.1 | pyrimidine utilization protein C | - |
| LK774_RS08205 (LK774_08215) | 1720597..1721286 | - | 690 | WP_014883310.1 | pyrimidine utilization protein B | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 175 a.a. Molecular weight: 19689.59 Da Isoelectric Point: 8.9464
>T226987 WP_176450254.1 NZ_CP088229:1716345-1716869 [Enterobacter kobei]
IVANLTIEMFSEGSDYDFRGFDCGEPSLNAFLTEHLVRQHKGRILRGYLLKDRDHPRVLGYYTLSGSCFEKAMLPSKTQQ
RRIPYVNVPSVTLGRLAVHKDLQGKEWGTTLVAHAMRVVYLASQAVGVHGIFVDALNEQAKRFYLKQGFIPLTGENSHSL
FFPTKSIEQLFEQA
IVANLTIEMFSEGSDYDFRGFDCGEPSLNAFLTEHLVRQHKGRILRGYLLKDRDHPRVLGYYTLSGSCFEKAMLPSKTQQ
RRIPYVNVPSVTLGRLAVHKDLQGKEWGTTLVAHAMRVVYLASQAVGVHGIFVDALNEQAKRFYLKQGFIPLTGENSHSL
FFPTKSIEQLFEQA
Download Length: 525 bp
>T226987 NZ_CP122676:1138410-1138721 [Escherichia coli]
ATGCACATCATTTCGAAAGCGCCATTTGAAGAGTGTGCGCGCAAATATCCTAACGACGCTCTGGCTCTACACTCATTGTA
TCGGGTTATTAAGGAAACGGATTTTTCTACGCCAGAAGAAATGCGAACGGCGTTTCCCAACCTCGACAATTTTAAATATC
GCAATAAATGGTACGTTCTGGATGTCGGCGGGAACAATCTTAGGGTTATTGCCTACATAAACTTTGTTAATAAGCGGTTC
TTTGTGAAGCACATAACTAATCACGCCGAGTATGACAAACTGACACGTTACTACAGAGAGAACAAAGAATGA
ATGCACATCATTTCGAAAGCGCCATTTGAAGAGTGTGCGCGCAAATATCCTAACGACGCTCTGGCTCTACACTCATTGTA
TCGGGTTATTAAGGAAACGGATTTTTCTACGCCAGAAGAAATGCGAACGGCGTTTCCCAACCTCGACAATTTTAAATATC
GCAATAAATGGTACGTTCTGGATGTCGGCGGGAACAATCTTAGGGTTATTGCCTACATAAACTTTGTTAATAAGCGGTTC
TTTGTGAAGCACATAACTAATCACGCCGAGTATGACAAACTGACACGTTACTACAGAGAGAACAAAGAATGA
Antitoxin
Download Length: 90 a.a. Molecular weight: 10278.72 Da Isoelectric Point: 5.8836
>AT226987 WP_014883303.1 NZ_CP088229:1716072-1716341 [Enterobacter kobei]
MPALKKQRIDLRLTDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNESSWNAVMDAIDNPPEPNERLKR
AAKRLRNME
MPALKKQRIDLRLTDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNESSWNAVMDAIDNPPEPNERLKR
AAKRLRNME
Download Length: 270 bp
>AT226987 NZ_CP122676:1138718-1139137 [Escherichia coli]
ATGACTGCTAATGCTGCACGCGCTGTTAAAGCAACAAGAGAACTGGTCAATGCAGTCCCCTTTCTGGGAGGCAGTGACTC
AGAAGATGATTATCGTGAAGCACTGGAACTGGTCGAATATTTGATTGAAGAAGATGATACTAATCCACTTATCGACTTTC
TGGCGAGCCGCATTGCAGAATATGAAAACAATAACGAAAAGTTTGCAGAGTTCGACAAAGCCGTTGCAGCAATGCCGGTT
GGCGTGGCGTTACTTCGTACGCTGATTGATCAACATAATTTGACCTATGCGGATTTGAAGAACGAAATCGGCTCTAAATC
TCTGGTCAGTCAGATTTTGTCTGGGCAACGATCCCTGACGATATCCCACATTAAGGCACTTTCAGCCCGATTTGGCGTTA
AGCCGGAATGGTTTCTTTGA
ATGACTGCTAATGCTGCACGCGCTGTTAAAGCAACAAGAGAACTGGTCAATGCAGTCCCCTTTCTGGGAGGCAGTGACTC
AGAAGATGATTATCGTGAAGCACTGGAACTGGTCGAATATTTGATTGAAGAAGATGATACTAATCCACTTATCGACTTTC
TGGCGAGCCGCATTGCAGAATATGAAAACAATAACGAAAAGTTTGCAGAGTTCGACAAAGCCGTTGCAGCAATGCCGGTT
GGCGTGGCGTTACTTCGTACGCTGATTGATCAACATAATTTGACCTATGCGGATTTGAAGAACGAAATCGGCTCTAAATC
TCTGGTCAGTCAGATTTTGTCTGGGCAACGATCCCTGACGATATCCCACATTAAGGCACTTTCAGCCCGATTTGGCGTTA
AGCCGGAATGGTTTCTTTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|