Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | vapBC/VapC-VagC |
Location | 639484..640133 | Replicon | chromosome |
Accession | NZ_CP087862 | ||
Organism | Moraxella bovis strain SAM57979 |
Toxin (Protein)
Gene name | vapC | Uniprot ID | - |
Locus tag | LP105_RS03400 | Protein ID | WP_264677937.1 |
Coordinates | 639732..640133 (+) | Length | 134 a.a. |
Antitoxin (Protein)
Gene name | vapB | Uniprot ID | - |
Locus tag | LP105_RS03395 | Protein ID | WP_112741908.1 |
Coordinates | 639484..639717 (+) | Length | 78 a.a. |
Genomic Context
Location: 637337..639436 (2100 bp)
Type: Others
Protein ID: WP_264683682.1
Type: Others
Protein ID: WP_264683682.1
Location: 639484..639717 (234 bp)
Type: Antitoxin
Protein ID: WP_112741908.1
Type: Antitoxin
Protein ID: WP_112741908.1
Location: 639732..640133 (402 bp)
Type: Toxin
Protein ID: WP_264677937.1
Type: Toxin
Protein ID: WP_264677937.1
Location: 640657..641157 (501 bp)
Type: Others
Protein ID: WP_112741909.1
Type: Others
Protein ID: WP_112741909.1
Location: 641279..642109 (831 bp)
Type: Others
Protein ID: WP_264677938.1
Type: Others
Protein ID: WP_264677938.1
Location: 634880..635329 (450 bp)
Type: Others
Protein ID: WP_264683685.1
Type: Others
Protein ID: WP_264683685.1
Location: 635511..636503 (993 bp)
Type: Others
Protein ID: WP_264683684.1
Type: Others
Protein ID: WP_264683684.1
Location: 636523..637116 (594 bp)
Type: Others
Protein ID: WP_208624078.1
Type: Others
Protein ID: WP_208624078.1
Location: 642209..642898 (690 bp)
Type: Others
Protein ID: WP_264677939.1
Type: Others
Protein ID: WP_264677939.1
Location: 643636..644055 (420 bp)
Type: Others
Protein ID: WP_264677940.1
Type: Others
Protein ID: WP_264677940.1
Location: 644307..644480 (174 bp)
Type: Others
Protein ID: WP_264677941.1
Type: Others
Protein ID: WP_264677941.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LP105_RS03375 (LP105_03355) | 634880..635329 | - | 450 | WP_264683685.1 | cytochrome c | - |
LP105_RS03380 (LP105_03360) | 635511..636503 | - | 993 | WP_264683684.1 | oxygen-dependent coproporphyrinogen oxidase | - |
LP105_RS03385 (LP105_03365) | 636523..637116 | - | 594 | WP_208624078.1 | GTP cyclohydrolase II | - |
LP105_RS03390 (LP105_03370) | 637337..639436 | + | 2100 | WP_264683682.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
LP105_RS03395 (LP105_03375) | 639484..639717 | + | 234 | WP_112741908.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin |
LP105_RS03400 (LP105_03380) | 639732..640133 | + | 402 | WP_264677937.1 | type II toxin-antitoxin system VapC family toxin | Toxin |
LP105_RS03405 (LP105_03385) | 640657..641157 | + | 501 | WP_112741909.1 | WG repeat-containing protein | - |
LP105_RS03410 (LP105_03390) | 641279..642109 | + | 831 | WP_264677938.1 | inositol monophosphatase family protein | - |
LP105_RS03415 (LP105_03395) | 642209..642898 | - | 690 | WP_264677939.1 | SIMPL domain-containing protein | - |
LP105_RS03425 (LP105_03405) | 643636..644055 | - | 420 | WP_264677940.1 | S4 domain-containing protein | - |
LP105_RS03430 (LP105_03410) | 644307..644480 | - | 174 | WP_264677941.1 | hypothetical protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
No matching records found |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 134 a.a. Molecular weight: 15071.29 Da Isoelectric Point: 6.8426
>T226411 WP_264677937.1 NZ_CP087862:639732-640133 [Moraxella bovis]
MFSFMLDTNICIYVIKERPIKALNKFNQYAGRICVSSIVASELYFGAYNSQFMDKNLHQVEDFLSRLTVLDYTAECSPHY
GEICADLTKQGKLISENDIHIASHARALGLTLITNNTDEFKRVSGLRIGNWAI
MFSFMLDTNICIYVIKERPIKALNKFNQYAGRICVSSIVASELYFGAYNSQFMDKNLHQVEDFLSRLTVLDYTAECSPHY
GEICADLTKQGKLISENDIHIASHARALGLTLITNNTDEFKRVSGLRIGNWAI
Download Length: 402 bp
>T226411 NZ_CP122461:c2572384-2571062 [Klebsiella pneumoniae subsp. pneumoniae]
ATGGCGACGCTTACCACCTGGATGAACAATGTGCGCGTGGGAACCTTAACCCGCCAGGCTAACGGGGCGCACAGTTTTCG
CTATGAGGAAGAGTGGCTGCGCAGCCCGCGCGCCAGACCGCTCTCCCTCTCACTGCCGCTGCAGTATGGCAATATCACTG
CCGACGCGGTGTATCACTATTTTGATAACCTGCTGCCCGACAGCCCGCAGGTCCGCGACCGGATCGTCAGGCGCTATCAG
GCGCGCTCGAAGCAGCCGTTCGATCTGCTGGCCGAAGTCGGGCGGGATAGCGTAGGGGCGGTGACCCTCCTGCCGCCGGG
GGAAGAGGCGCACCTGGAAGGATTACGCTGGCAGACGCTGGACGAGGCGCAGCTCACCGCTTTGCTGACCGCTTACCAGT
CGGATATCCCCCTCGGGATGATTACCAGCCAGGACGATTTCCGTATCTCGGTGGCCGGCGCCCAGGAGAAAACGGCGCTG
CTGCGGATGGGCGAGCAGTGGTGTATTCCGCAGGGCGCCACGCCGACCACGCATATCATTAAGCTGCCCATCGGCGAGAT
AAAGCAGCCCAATGCGACGCTGGATCTGCGCGAAAGCGTGGATAATGAGTATCTGTGCCTGGCGCTGGCCAGAGAACTGG
GCCTGGCGGTGCCGGAAGCGGAGATCATCACCACCCCGCGGATCCGCGCCCTGGCGGTAACCCGCTTCGACCGGCGCTGG
GCGCAGGAGGGACGGGTGCTGCTGCGTCTGCCGCAGGAGGATCTGTGTCAGGCTTTTGGTCTTCCTTCAGCGATGAAATA
TGAGTCTGACGGCGGGCCGGGTATCGCCGCGATCATGACCTTTCTGCTGGGCTCGAGTGAAGCGCTGAAAGATCGCTATG
ACTTTATGAAGTTCATGGTCTTCCAGTGGCTGACGGGGGCGACGGACGGTCACGCAAAAAACTTCTCAATTTACCTGTTG
CCCGGCGGCAGCTACCGCTTAACACCGTTCTACGACATTATTTCGGCGTTTCCGGTGCTGGGCGGCACGGGACTGCATCT
GCGCGATCTGAAGCTGTCGATGGGGCTCAATGCCACAAAAGGGCGTAAAACAGAGATTAACGCCATCTATCCGCGTCATT
TTCTGGCGACGGCCAAAGCGGTGAACTTTCCCCGGGAGCAGATGCTGGCGATCCTCCAGGAGTTTGCCGGGCATGTGCCG
CAGGCAATCGAAAGCGCTCGCCGGACGCTGCCGGCGGACTTTTCCAGCCACGTCTGGCAGGCCATTACAGAGAACATGCT
GAAGCTGCACGCCCGCCTGCAGCAAGGGCTGCAGGCGCTATAG
ATGGCGACGCTTACCACCTGGATGAACAATGTGCGCGTGGGAACCTTAACCCGCCAGGCTAACGGGGCGCACAGTTTTCG
CTATGAGGAAGAGTGGCTGCGCAGCCCGCGCGCCAGACCGCTCTCCCTCTCACTGCCGCTGCAGTATGGCAATATCACTG
CCGACGCGGTGTATCACTATTTTGATAACCTGCTGCCCGACAGCCCGCAGGTCCGCGACCGGATCGTCAGGCGCTATCAG
GCGCGCTCGAAGCAGCCGTTCGATCTGCTGGCCGAAGTCGGGCGGGATAGCGTAGGGGCGGTGACCCTCCTGCCGCCGGG
GGAAGAGGCGCACCTGGAAGGATTACGCTGGCAGACGCTGGACGAGGCGCAGCTCACCGCTTTGCTGACCGCTTACCAGT
CGGATATCCCCCTCGGGATGATTACCAGCCAGGACGATTTCCGTATCTCGGTGGCCGGCGCCCAGGAGAAAACGGCGCTG
CTGCGGATGGGCGAGCAGTGGTGTATTCCGCAGGGCGCCACGCCGACCACGCATATCATTAAGCTGCCCATCGGCGAGAT
AAAGCAGCCCAATGCGACGCTGGATCTGCGCGAAAGCGTGGATAATGAGTATCTGTGCCTGGCGCTGGCCAGAGAACTGG
GCCTGGCGGTGCCGGAAGCGGAGATCATCACCACCCCGCGGATCCGCGCCCTGGCGGTAACCCGCTTCGACCGGCGCTGG
GCGCAGGAGGGACGGGTGCTGCTGCGTCTGCCGCAGGAGGATCTGTGTCAGGCTTTTGGTCTTCCTTCAGCGATGAAATA
TGAGTCTGACGGCGGGCCGGGTATCGCCGCGATCATGACCTTTCTGCTGGGCTCGAGTGAAGCGCTGAAAGATCGCTATG
ACTTTATGAAGTTCATGGTCTTCCAGTGGCTGACGGGGGCGACGGACGGTCACGCAAAAAACTTCTCAATTTACCTGTTG
CCCGGCGGCAGCTACCGCTTAACACCGTTCTACGACATTATTTCGGCGTTTCCGGTGCTGGGCGGCACGGGACTGCATCT
GCGCGATCTGAAGCTGTCGATGGGGCTCAATGCCACAAAAGGGCGTAAAACAGAGATTAACGCCATCTATCCGCGTCATT
TTCTGGCGACGGCCAAAGCGGTGAACTTTCCCCGGGAGCAGATGCTGGCGATCCTCCAGGAGTTTGCCGGGCATGTGCCG
CAGGCAATCGAAAGCGCTCGCCGGACGCTGCCGGCGGACTTTTCCAGCCACGTCTGGCAGGCCATTACAGAGAACATGCT
GAAGCTGCACGCCCGCCTGCAGCAAGGGCTGCAGGCGCTATAG
Antitoxin
Download Length: 78 a.a. Molecular weight: 8990.22 Da Isoelectric Point: 6.2884
>AT226411 WP_112741908.1 NZ_CP087862:639484-639717 [Moraxella bovis]
MQTSVFFNNRTQAVRIPAKFRFDDDVKAVMIRKVGNERILTPIDGVWDSFFLSDERASDDFMANRPTMPKSERLTFD
MQTSVFFNNRTQAVRIPAKFRFDDDVKAVMIRKVGNERILTPIDGVWDSFFLSDERASDDFMANRPTMPKSERLTFD
Download Length: 234 bp
>AT226411 NZ_CP122461:c2572650-2572384 [Klebsiella pneumoniae subsp. pneumoniae]
ATGAATTCCCCGCAGATATACAGTCCCGTGCAGCTGGCCAATTACCTGAAGCTGCTGCGCCAGCAGAACCACTGGACCCA
GGATGCGCTGGCCAGGCGGATCGGCATTAAGCAGGCCACGCTGTCCAATTTTGAAAATCACCCCGACAAAACCACCTTAA
CCACGCTGTTTAAGATCCTCCAGTCGCTGGGGGTGGTGATGACGCTGAACGCCAAAGCTGCTGAGACGGCGCCGGCTCCC
GATAACAACACGGACCTTGACTGGTAA
ATGAATTCCCCGCAGATATACAGTCCCGTGCAGCTGGCCAATTACCTGAAGCTGCTGCGCCAGCAGAACCACTGGACCCA
GGATGCGCTGGCCAGGCGGATCGGCATTAAGCAGGCCACGCTGTCCAATTTTGAAAATCACCCCGACAAAACCACCTTAA
CCACGCTGTTTAAGATCCTCCAGTCGCTGGGGGTGGTGATGACGCTGAACGCCAAAGCTGCTGAGACGGCGCCGGCTCCC
GATAACAACACGGACCTTGACTGGTAA