Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 2004379..2004956 Replicon chromosome
Accession NZ_CP087828
Organism Moraxella bovis strain SAM102600

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag LP099_RS10110 Protein ID WP_078275234.1
Coordinates 2004379..2004714 (-) Length 112 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag LP099_RS10115 Protein ID WP_078275235.1
Coordinates 2004714..2004956 (-) Length 81 a.a.

Genomic Context


LP099_RS10085LP099_RS10090LP099_RS10095LP099_RS10120LP099_RS10130LP099_RS10135LP099_RS10140LP099_RS10100LP099_RS10105LP099_RS10110LP099_RS10115LP099_RS10125
Location: 1999720..1999920 (201 bp)
Type: Others
Protein ID: WP_112741955.1
Location: 2000079..2000663 (585 bp)
Type: Others
Protein ID: WP_112741954.1
Location: 2000828..2002972 (2145 bp)
Type: Others
Protein ID: WP_264684206.1
Location: 2005163..2006242 (1080 bp)
Type: Others
Protein ID: WP_029103111.1
Location: 2007535..2008161 (627 bp)
Type: Others
Protein ID: WP_078275237.1
Location: 2008321..2008626 (306 bp)
Type: Others
Protein ID: WP_078275238.1
Location: 2008635..2009057 (423 bp)
Type: Others
Protein ID: WP_078275239.1
Location: 2003062..2003250 (189 bp)
Type: Others
Protein ID: WP_143821748.1
Location: 2003322..2004317 (996 bp)
Type: Others
Protein ID: WP_208624081.1
Location: 2004379..2004714 (336 bp)
Type: Toxin
Protein ID: WP_078275234.1
Location: 2004714..2004956 (243 bp)
Type: Antitoxin
Protein ID: WP_078275235.1
Location: 2006624..2007346 (723 bp)
Type: Others
Protein ID: WP_078275236.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
LP099_RS10085 (LP099_09990)1999720..1999920+201WP_112741955.1hypothetical protein-
LP099_RS10090 (LP099_09995)2000079..2000663+585WP_112741954.1hypothetical protein-
LP099_RS10095 (LP099_10000)2000828..2002972+2145WP_264684206.1cation-translocating P-type ATPase-
LP099_RS10100 (LP099_10005)2003062..2003250-189WP_143821748.1hypothetical protein-
LP099_RS10105 (LP099_10010)2003322..2004317-996WP_208624081.1polyprenyl synthetase family protein-
LP099_RS10110 (LP099_10015)2004379..2004714-336WP_078275234.1type II toxin-antitoxin system RelE/ParE family toxinToxin
LP099_RS10115 (LP099_10020)2004714..2004956-243WP_078275235.1type II toxin-antitoxin system RelB/DinJ family antitoxinAntitoxin
LP099_RS10120 (LP099_10025)2005163..2006242+1080WP_029103111.13-deoxy-7-phosphoheptulonate synthase-
LP099_RS10125 (LP099_10030)2006624..2007346-723WP_078275236.1tRNA pseudouridine(65) synthase TruC-
LP099_RS10130 (LP099_10035)2007535..2008161+627WP_078275237.1septation protein IspZ-
LP099_RS10135 (LP099_10040)2008321..2008626+306WP_078275238.1YciI family protein-
LP099_RS10140 (LP099_10045)2008635..2009057+423WP_078275239.1hypothetical protein-

Associated MGEs


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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.



Sequences


Toxin        


Download         Length: 112 a.a.        Molecular weight: 13059.98 Da        Isoelectric Point: 8.8194

>T226299 WP_078275234.1 NZ_CP087828:c2004714-2004379 [Moraxella bovis]
MCELMYELEFDERALKEWQKLGDTIKTQFKKRLAKVLKNPHIIANRLSGGQNLYKINFRSAGYRLVYQVEDDKVVVFVIV
MGKREKNAVYDTAEEWLAERQSDNQDTQSVK

Download         Length: 336 bp

>T226299 NZ_CP122407:363133-363429 [Rugamonas sp. DEMB1]
ATGGAGAAGATCTCGCCCCATTACAGCTTGCCAAAGGTGAAGGCCCTCATTGACGAGGGCCGGGTGGCGTCGACCTTTTC
CGCGTTGACGGGCGCTGCGGCATTGGGTATCGACTTCGCGGGGATGGTCGCTATTGTTAAGGCGCTGACTAGGCGCGACT
TCTACAAAAGCATGACCTCGCGTGCCGACCACCACATCTGGCAAGACGTGTACCGTCCAAGCACCCCGGTCGGCAAGGTC
TATCTAAAACTCACTGTCGTTGACGGCGTGTTGATCGTCTCGTTCAAGGAGCTGTGA

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9034.47 Da        Isoelectric Point: 4.7527

>AT226299 WP_078275235.1 NZ_CP087828:c2004956-2004714 [Moraxella bovis]
MANIVARVDDDLKAQSFLVLQELGVTPSELIRQTLQYVAYHKKLPFKTVVLTDEDSELLALAKERLDNPAPRIKVSLDEL

Download         Length: 243 bp

>AT226299 NZ_CP122407:363431-363670 [Rugamonas sp. DEMB1]
ATGAAATGTCCTGTTTGCGCAGCGGCCGAGCTGGTGCGGGACTGCCGCGATCTGCCCCATGCCTACAAAGGCGCAAGCAC
GATGATTGCCGCCGTCTGCGGCGATTACTGTCCCGCTTGCGGCGAAAGCGTGCTCGACGCGAAAGAGTCGTCGCGTGTCA
GCGCGGCGATGCTGGCCTTCCATCGACAGGTCGAGGCGGCGAATCGCGAAGCGGATCATATTGTTGGAACGCCGCCCTGA

Similar Proteins


Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures


Toxin

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Source
ID
Structure
No matching records found


Antitoxin

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Source
ID
Structure
No matching records found

References