Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/ParE-RelB |
Location | 2004379..2004956 | Replicon | chromosome |
Accession | NZ_CP087828 | ||
Organism | Moraxella bovis strain SAM102600 |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | LP099_RS10110 | Protein ID | WP_078275234.1 |
Coordinates | 2004379..2004714 (-) | Length | 112 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | LP099_RS10115 | Protein ID | WP_078275235.1 |
Coordinates | 2004714..2004956 (-) | Length | 81 a.a. |
Genomic Context
Location: 1999720..1999920 (201 bp)
Type: Others
Protein ID: WP_112741955.1
Type: Others
Protein ID: WP_112741955.1
Location: 2000079..2000663 (585 bp)
Type: Others
Protein ID: WP_112741954.1
Type: Others
Protein ID: WP_112741954.1
Location: 2000828..2002972 (2145 bp)
Type: Others
Protein ID: WP_264684206.1
Type: Others
Protein ID: WP_264684206.1
Location: 2005163..2006242 (1080 bp)
Type: Others
Protein ID: WP_029103111.1
Type: Others
Protein ID: WP_029103111.1
Location: 2007535..2008161 (627 bp)
Type: Others
Protein ID: WP_078275237.1
Type: Others
Protein ID: WP_078275237.1
Location: 2008321..2008626 (306 bp)
Type: Others
Protein ID: WP_078275238.1
Type: Others
Protein ID: WP_078275238.1
Location: 2008635..2009057 (423 bp)
Type: Others
Protein ID: WP_078275239.1
Type: Others
Protein ID: WP_078275239.1
Location: 2003062..2003250 (189 bp)
Type: Others
Protein ID: WP_143821748.1
Type: Others
Protein ID: WP_143821748.1
Location: 2003322..2004317 (996 bp)
Type: Others
Protein ID: WP_208624081.1
Type: Others
Protein ID: WP_208624081.1
Location: 2004379..2004714 (336 bp)
Type: Toxin
Protein ID: WP_078275234.1
Type: Toxin
Protein ID: WP_078275234.1
Location: 2004714..2004956 (243 bp)
Type: Antitoxin
Protein ID: WP_078275235.1
Type: Antitoxin
Protein ID: WP_078275235.1
Location: 2006624..2007346 (723 bp)
Type: Others
Protein ID: WP_078275236.1
Type: Others
Protein ID: WP_078275236.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LP099_RS10085 (LP099_09990) | 1999720..1999920 | + | 201 | WP_112741955.1 | hypothetical protein | - |
LP099_RS10090 (LP099_09995) | 2000079..2000663 | + | 585 | WP_112741954.1 | hypothetical protein | - |
LP099_RS10095 (LP099_10000) | 2000828..2002972 | + | 2145 | WP_264684206.1 | cation-translocating P-type ATPase | - |
LP099_RS10100 (LP099_10005) | 2003062..2003250 | - | 189 | WP_143821748.1 | hypothetical protein | - |
LP099_RS10105 (LP099_10010) | 2003322..2004317 | - | 996 | WP_208624081.1 | polyprenyl synthetase family protein | - |
LP099_RS10110 (LP099_10015) | 2004379..2004714 | - | 336 | WP_078275234.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
LP099_RS10115 (LP099_10020) | 2004714..2004956 | - | 243 | WP_078275235.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
LP099_RS10120 (LP099_10025) | 2005163..2006242 | + | 1080 | WP_029103111.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
LP099_RS10125 (LP099_10030) | 2006624..2007346 | - | 723 | WP_078275236.1 | tRNA pseudouridine(65) synthase TruC | - |
LP099_RS10130 (LP099_10035) | 2007535..2008161 | + | 627 | WP_078275237.1 | septation protein IspZ | - |
LP099_RS10135 (LP099_10040) | 2008321..2008626 | + | 306 | WP_078275238.1 | YciI family protein | - |
LP099_RS10140 (LP099_10045) | 2008635..2009057 | + | 423 | WP_078275239.1 | hypothetical protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
No matching records found |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 112 a.a. Molecular weight: 13059.98 Da Isoelectric Point: 8.8194
>T226299 WP_078275234.1 NZ_CP087828:c2004714-2004379 [Moraxella bovis]
MCELMYELEFDERALKEWQKLGDTIKTQFKKRLAKVLKNPHIIANRLSGGQNLYKINFRSAGYRLVYQVEDDKVVVFVIV
MGKREKNAVYDTAEEWLAERQSDNQDTQSVK
MCELMYELEFDERALKEWQKLGDTIKTQFKKRLAKVLKNPHIIANRLSGGQNLYKINFRSAGYRLVYQVEDDKVVVFVIV
MGKREKNAVYDTAEEWLAERQSDNQDTQSVK
Download Length: 336 bp
>T226299 NZ_CP122407:363133-363429 [Rugamonas sp. DEMB1]
ATGGAGAAGATCTCGCCCCATTACAGCTTGCCAAAGGTGAAGGCCCTCATTGACGAGGGCCGGGTGGCGTCGACCTTTTC
CGCGTTGACGGGCGCTGCGGCATTGGGTATCGACTTCGCGGGGATGGTCGCTATTGTTAAGGCGCTGACTAGGCGCGACT
TCTACAAAAGCATGACCTCGCGTGCCGACCACCACATCTGGCAAGACGTGTACCGTCCAAGCACCCCGGTCGGCAAGGTC
TATCTAAAACTCACTGTCGTTGACGGCGTGTTGATCGTCTCGTTCAAGGAGCTGTGA
ATGGAGAAGATCTCGCCCCATTACAGCTTGCCAAAGGTGAAGGCCCTCATTGACGAGGGCCGGGTGGCGTCGACCTTTTC
CGCGTTGACGGGCGCTGCGGCATTGGGTATCGACTTCGCGGGGATGGTCGCTATTGTTAAGGCGCTGACTAGGCGCGACT
TCTACAAAAGCATGACCTCGCGTGCCGACCACCACATCTGGCAAGACGTGTACCGTCCAAGCACCCCGGTCGGCAAGGTC
TATCTAAAACTCACTGTCGTTGACGGCGTGTTGATCGTCTCGTTCAAGGAGCTGTGA
Antitoxin
Download Length: 81 a.a. Molecular weight: 9034.47 Da Isoelectric Point: 4.7527
>AT226299 WP_078275235.1 NZ_CP087828:c2004956-2004714 [Moraxella bovis]
MANIVARVDDDLKAQSFLVLQELGVTPSELIRQTLQYVAYHKKLPFKTVVLTDEDSELLALAKERLDNPAPRIKVSLDEL
MANIVARVDDDLKAQSFLVLQELGVTPSELIRQTLQYVAYHKKLPFKTVVLTDEDSELLALAKERLDNPAPRIKVSLDEL
Download Length: 243 bp
>AT226299 NZ_CP122407:363431-363670 [Rugamonas sp. DEMB1]
ATGAAATGTCCTGTTTGCGCAGCGGCCGAGCTGGTGCGGGACTGCCGCGATCTGCCCCATGCCTACAAAGGCGCAAGCAC
GATGATTGCCGCCGTCTGCGGCGATTACTGTCCCGCTTGCGGCGAAAGCGTGCTCGACGCGAAAGAGTCGTCGCGTGTCA
GCGCGGCGATGCTGGCCTTCCATCGACAGGTCGAGGCGGCGAATCGCGAAGCGGATCATATTGTTGGAACGCCGCCCTGA
ATGAAATGTCCTGTTTGCGCAGCGGCCGAGCTGGTGCGGGACTGCCGCGATCTGCCCCATGCCTACAAAGGCGCAAGCAC
GATGATTGCCGCCGTCTGCGGCGATTACTGTCCCGCTTGCGGCGAAAGCGTGCTCGACGCGAAAGAGTCGTCGCGTGTCA
GCGCGGCGATGCTGGCCTTCCATCGACAGGTCGAGGCGGCGAATCGCGAAGCGGATCATATTGTTGGAACGCCGCCCTGA