Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | hicAB/HicA-HicB |
| Location | 568734..569392 | Replicon | chromosome |
| Accession | NZ_CP087823 | ||
| Organism | Moraxella bovis strain SAM102602 | ||
Toxin (Protein)
| Gene name | hicA | Uniprot ID | - |
| Locus tag | LP123_RS02895 | Protein ID | WP_078274940.1 |
| Coordinates | 568734..568922 (+) | Length | 63 a.a. |
Antitoxin (Protein)
| Gene name | hicB | Uniprot ID | - |
| Locus tag | LP123_RS02900 | Protein ID | WP_112741846.1 |
| Coordinates | 568985..569392 (+) | Length | 136 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP123_RS02840 (LP123_02825) | 564135..564554 | - | 420 | WP_112741841.1 | S24 family peptidase | - |
| LP123_RS02845 (LP123_02830) | 564551..564838 | - | 288 | WP_078274962.1 | ORF6C domain-containing protein | - |
| LP123_RS02850 (LP123_02835) | 565033..565332 | - | 300 | WP_078274961.1 | helix-turn-helix transcriptional regulator | - |
| LP123_RS02855 (LP123_02840) | 565497..565706 | + | 210 | WP_078274960.1 | hypothetical protein | - |
| LP123_RS02860 (LP123_02845) | 565721..565912 | + | 192 | WP_264676101.1 | DNA-binding protein | - |
| LP123_RS02865 (LP123_02850) | 565921..566121 | + | 201 | WP_264676324.1 | hypothetical protein | - |
| LP123_RS02870 (LP123_02855) | 566199..566951 | + | 753 | WP_078274945.1 | hypothetical protein | - |
| LP123_RS02875 (LP123_02860) | 566995..567339 | - | 345 | WP_078274944.1 | helix-turn-helix transcriptional regulator | - |
| LP123_RS02880 (LP123_02865) | 567462..567668 | + | 207 | WP_264676102.1 | DNA-binding protein | - |
| LP123_RS02885 (LP123_02870) | 567775..568374 | + | 600 | WP_078274942.1 | antA/AntB antirepressor family protein | - |
| LP123_RS02890 (LP123_02875) | 568376..568591 | + | 216 | WP_078274941.1 | hypothetical protein | - |
| LP123_RS02895 (LP123_02880) | 568734..568922 | + | 189 | WP_078274940.1 | type II toxin-antitoxin system HicA family toxin | Toxin |
| LP123_RS02900 (LP123_02885) | 568985..569392 | + | 408 | WP_112741846.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin |
| LP123_RS02905 (LP123_02890) | 569468..570439 | + | 972 | WP_112741847.1 | phage tail tape measure protein | - |
| LP123_RS02910 (LP123_02895) | 570436..570768 | + | 333 | WP_112741848.1 | hypothetical protein | - |
| LP123_RS02915 (LP123_02900) | 570702..571139 | + | 438 | WP_162860346.1 | hypothetical protein | - |
| LP123_RS02920 (LP123_02905) | 571193..571999 | + | 807 | WP_264684230.1 | hypothetical protein | - |
| LP123_RS02925 (LP123_02910) | 572000..572344 | + | 345 | WP_078274937.1 | hypothetical protein | - |
| LP123_RS02930 (LP123_02915) | 572332..574161 | + | 1830 | WP_078274936.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 550807..578629 | 27822 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 63 a.a. Molecular weight: 7047.13 Da Isoelectric Point: 10.3659
>T226273 WP_078274940.1 NZ_CP087823:568734-568922 [Moraxella bovis]
MPPSSDEMIKRITEDGWYFVKQKGSHKHYKHPTKEGKVTIPNGRENLPKGTLKSIIKQAGLD
MPPSSDEMIKRITEDGWYFVKQKGSHKHYKHPTKEGKVTIPNGRENLPKGTLKSIIKQAGLD
Download Length: 189 bp
>T226273 NZ_CP122379:c2318367-2318110 [Aequorivita sp. Ant34-E75]
ATGAAGTATATTTTTGTCGACGAATCTTGGGAAGATTATCTGTATTGGCAAAAAACCGACAAAAAGAAGTTGAAAAAAAT
AAATGAAATTCTAAAAGATATCGCTCGAAATCCTTTTGATGGCATTGGAAAACCTGAACCTTTAAAACACAAATACGCTG
GCTTCTGGTCTAGGCGAATTGATAGCGAACATAGGCTAATTTATAAATTTAAAGAGGGTGAAATATTAATTGCAAAATGC
CGCTTCCATTACGACTGA
ATGAAGTATATTTTTGTCGACGAATCTTGGGAAGATTATCTGTATTGGCAAAAAACCGACAAAAAGAAGTTGAAAAAAAT
AAATGAAATTCTAAAAGATATCGCTCGAAATCCTTTTGATGGCATTGGAAAACCTGAACCTTTAAAACACAAATACGCTG
GCTTCTGGTCTAGGCGAATTGATAGCGAACATAGGCTAATTTATAAATTTAAAGAGGGTGAAATATTAATTGCAAAATGC
CGCTTCCATTACGACTGA
Antitoxin
Download Length: 136 a.a. Molecular weight: 14756.85 Da Isoelectric Point: 4.2244
>AT226273 WP_112741846.1 NZ_CP087823:568985-569392 [Moraxella bovis]
MLFPIAIEKPANENECYGVIVPDIAGCFSAGDTPDEAIKNAYEAISLHLEGMAEDGDTLPTAKPIFYHQDNSEFDGMLWA
VVDVDMSAFMGKAEKINVTLPSLLITKIDEKVLSHKSLYKSRSNYLAQLAMADLG
MLFPIAIEKPANENECYGVIVPDIAGCFSAGDTPDEAIKNAYEAISLHLEGMAEDGDTLPTAKPIFYHQDNSEFDGMLWA
VVDVDMSAFMGKAEKINVTLPSLLITKIDEKVLSHKSLYKSRSNYLAQLAMADLG
Download Length: 408 bp
>AT226273 NZ_CP122379:c2318623-2318369 [Aequorivita sp. Ant34-E75]
ATGCAAATTACAACCGTTTCGGACTTTAGAAAGGATATTAAAACGTACTTAGATCGAGTTGTAAAGAACGTTGAAACTTT
AATTATTAATCGCGGAAAGGATTCTGGAATAGTAATCATGTCTTTGCAGGAGTACAATTCCTTAATGGCTACAAATCACG
AATTGTCTTCTCGAAAGAATGAAAGGAGATTAGATTCTGCAATTGACAAACTTAATAGCGGATCTACTTTTAACAAAGAA
CTAATCGAAGATTAA
ATGCAAATTACAACCGTTTCGGACTTTAGAAAGGATATTAAAACGTACTTAGATCGAGTTGTAAAGAACGTTGAAACTTT
AATTATTAATCGCGGAAAGGATTCTGGAATAGTAATCATGTCTTTGCAGGAGTACAATTCCTTAATGGCTACAAATCACG
AATTGTCTTCTCGAAAGAATGAAAGGAGATTAGATTCTGCAATTGACAAACTTAATAGCGGATCTACTTTTAACAAAGAA
CTAATCGAAGATTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|
Antitoxin
| Source | ID | Structure |
|---|