Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 1964399..1964976 Replicon chromosome
Accession NZ_CP087800
Organism Moraxella bovis strain SAM57953

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag LP087_RS09885 Protein ID WP_078275234.1
Coordinates 1964399..1964734 (-) Length 112 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag LP087_RS09890 Protein ID WP_078275235.1
Coordinates 1964734..1964976 (-) Length 81 a.a.

Genomic Context

LP087_RS09860LP087_RS09865LP087_RS09870LP087_RS09895LP087_RS09905LP087_RS09910LP087_RS09915LP087_RS09875LP087_RS09880LP087_RS09885LP087_RS09890LP087_RS09900
Location: 1959739..1959939 (201 bp)
Type: Others
Protein ID: WP_112741955.1
Location: 1960099..1960683 (585 bp)
Type: Others
Protein ID: WP_112741954.1
Location: 1960848..1962992 (2145 bp)
Type: Others
Protein ID: WP_264676147.1
Location: 1965183..1966262 (1080 bp)
Type: Others
Protein ID: WP_029103111.1
Location: 1967555..1968181 (627 bp)
Type: Others
Protein ID: WP_078275237.1
Location: 1968341..1968646 (306 bp)
Type: Others
Protein ID: WP_078275238.1
Location: 1968655..1969077 (423 bp)
Type: Others
Protein ID: WP_078275239.1
Location: 1963082..1963270 (189 bp)
Type: Others
Protein ID: WP_143821748.1
Location: 1963342..1964337 (996 bp)
Type: Others
Protein ID: WP_208624081.1
Location: 1964399..1964734 (336 bp)
Type: Toxin
Protein ID: WP_078275234.1
Location: 1964734..1964976 (243 bp)
Type: Antitoxin
Protein ID: WP_078275235.1
Location: 1966644..1967366 (723 bp)
Type: Others
Protein ID: WP_078275236.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
LP087_RS09860 (LP087_09760)1959739..1959939+201WP_112741955.1hypothetical protein-
LP087_RS09865 (LP087_09765)1960099..1960683+585WP_112741954.1hypothetical protein-
LP087_RS09870 (LP087_09770)1960848..1962992+2145WP_264676147.1cation-translocating P-type ATPase-
LP087_RS09875 (LP087_09775)1963082..1963270-189WP_143821748.1hypothetical protein-
LP087_RS09880 (LP087_09780)1963342..1964337-996WP_208624081.1polyprenyl synthetase family protein-
LP087_RS09885 (LP087_09785)1964399..1964734-336WP_078275234.1type II toxin-antitoxin system RelE/ParE family toxinToxin
LP087_RS09890 (LP087_09790)1964734..1964976-243WP_078275235.1type II toxin-antitoxin system RelB/DinJ family antitoxinAntitoxin
LP087_RS09895 (LP087_09795)1965183..1966262+1080WP_029103111.13-deoxy-7-phosphoheptulonate synthase-
LP087_RS09900 (LP087_09800)1966644..1967366-723WP_078275236.1tRNA pseudouridine(65) synthase TruC-
LP087_RS09905 (LP087_09805)1967555..1968181+627WP_078275237.1septation protein IspZ-
LP087_RS09910 (LP087_09810)1968341..1968646+306WP_078275238.1YciI family protein-
LP087_RS09915 (LP087_09815)1968655..1969077+423WP_078275239.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(8-84)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(2-63)


Sequences

Toxin        


Download         Length: 112 a.a.        Molecular weight: 13059.98 Da        Isoelectric Point: 8.8194

>T226197 WP_078275234.1 NZ_CP087800:c1964734-1964399 [Moraxella bovis]
MCELMYELEFDERALKEWQKLGDTIKTQFKKRLAKVLKNPHIIANRLSGGQNLYKINFRSAGYRLVYQVEDDKVVVFVIV
MGKREKNAVYDTAEEWLAERQSDNQDTQSVK

Download         Length: 336 bp

>T226197 NZ_CP122318:c138159-137830 [Escherichia coli]
ATGAACACTCTACCTGCTACAATTTCGCAGGCGGCGAAGCCCTGCCTGTCGCCAGTGGCTGTCTGGCAAATGCTACTGAC
ACGCCTGCTGGAACAACACTATGGCCTGACACTGAACGACACGCCGTTCAGTGATGAAACTGTTATTAAGGAACATATCG
ATGCTGGTATCACTCTGGCCGATGCAGTCAATTTTCTGGTGGAAAAGTACGAACTGGTACGTATCGATCACAGAGGATTT
TCGTGGCAACAACAGTCTCCATATATTTCCGTAGTAGATATTCTGCGAGCAAGGCGCTCTACCGGCTTGCTAAAAACTAA
TGTGAAATAA

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9034.47 Da        Isoelectric Point: 4.7527

>AT226197 WP_078275235.1 NZ_CP087800:c1964976-1964734 [Moraxella bovis]
MANIVARVDDDLKAQSFLVLQELGVTPSELIRQTLQYVAYHKKLPFKTVVLTDEDSELLALAKERLDNPAPRIKVSLDEL

Download         Length: 243 bp

>AT226197 NZ_CP122318:c138497-138180 [Escherichia coli]
ATGAGCAACACCACATGGGGCCTGCAGCGAGATATCACGCCGCGCCTGGGAGCACGTCTGGTGCAGGAGGGCAACCAGCT
GCACTATCTGGCTGACCGGGCCAGTATCACCGGTAAGTTTAGTGACGCCGAATGTCCTAAGCTGGATGTGGTATTTCCAC
ATTTTATCAGCCAGATAGAGTCGATGCTGACCACTGGTGAACTGAATCCCCGCCATGCCCAATGCGTCACCCTGTACCAC
AACGGTTTTACCTGCGAAGCCGATACTCTTGGTAGTTGCGGCTACGTATACATCGCTGTTTACCCCACTCAACGCTAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References