Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) vapBC/VapC-VagC
Location 436041..436693 Replicon chromosome
Accession NZ_CP087798
Organism Moraxella bovis strain SAM57954

Toxin (Protein)


Gene name vapC Uniprot ID -
Locus tag LP098_RS02205 Protein ID WP_078275188.1
Coordinates 436301..436693 (+) Length 131 a.a.

Antitoxin (Protein)


Gene name vapB Uniprot ID -
Locus tag LP098_RS02200 Protein ID WP_264675982.1
Coordinates 436041..436304 (+) Length 88 a.a.

Genomic Context

LP098_RS02170LP098_RS02175LP098_RS02180LP098_RS02190LP098_RS02195LP098_RS02200LP098_RS02205LP098_RS02210LP098_RS02185LP098_RS02215LP098_RS02220LP098_RS02225LP098_RS02230LP098_RS02235LP098_RS02240
Location: 431326..432660 (1335 bp)
Type: Others
Protein ID: WP_112741795.1
Location: 432804..433097 (294 bp)
Type: Others
Protein ID: WP_029103533.1
Location: 433090..433362 (273 bp)
Type: Others
Protein ID: WP_228157760.1
Location: 433967..434344 (378 bp)
Type: Others
Protein ID: WP_264675984.1
Location: 434702..435961 (1260 bp)
Type: Others
Protein ID: WP_264675983.1
Location: 436041..436304 (264 bp)
Type: Antitoxin
Protein ID: WP_264675982.1
Location: 436301..436693 (393 bp)
Type: Toxin
Protein ID: WP_078275188.1
Location: 436816..437346 (531 bp)
Type: Others
Protein ID: WP_078275187.1
Location: 433427..433882 (456 bp)
Type: Others
Protein ID: WP_264675985.1
Location: 437343..437909 (567 bp)
Type: Others
Protein ID: WP_078275186.1
Location: 437912..438148 (237 bp)
Type: Others
Protein ID: WP_078275185.1
Location: 438145..438603 (459 bp)
Type: Others
Protein ID: WP_078275184.1
Location: 438683..439705 (1023 bp)
Type: Others
Protein ID: WP_078275183.1
Location: 439736..440614 (879 bp)
Type: Others
Protein ID: WP_112741796.1
Location: 440660..441601 (942 bp)
Type: Others
Protein ID: WP_078275181.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
LP098_RS02170 (LP098_02155)431326..432660+1335WP_112741795.1deoxyguanosinetriphosphate triphosphohydrolase-
LP098_RS02175 (LP098_02160)432804..433097+294WP_029103533.1type II toxin-antitoxin system RelB/DinJ family antitoxin-
LP098_RS02180 (LP098_02165)433090..433362+273WP_228157760.1type II toxin-antitoxin system YafQ family toxin-
LP098_RS02185 (LP098_02170)433427..433882-456WP_264675985.1type IV secretion protein Rhs-
LP098_RS02190 (LP098_02175)433967..434344+378WP_264675984.1hypothetical protein-
LP098_RS02195 (LP098_02180)434702..435961+1260WP_264675983.1replication-associated recombination protein A-
LP098_RS02200 (LP098_02185)436041..436304+264WP_264675982.1type II toxin-antitoxin system VapB family antitoxinAntitoxin
LP098_RS02205 (LP098_02190)436301..436693+393WP_078275188.1type II toxin-antitoxin system VapC family toxinToxin
LP098_RS02210 (LP098_02195)436816..437346+531WP_078275187.1HI_0552 family protein-
LP098_RS02215 (LP098_02200)437343..437909-567WP_078275186.1hypothetical protein-
LP098_RS02220 (LP098_02205)437912..438148-237WP_078275185.1sulfurtransferase TusA-
LP098_RS02225 (LP098_02210)438145..438603-459WP_078275184.1acyl-CoA thioesterase-
LP098_RS02230 (LP098_02215)438683..439705-1023WP_078275183.1hypothetical protein-
LP098_RS02235 (LP098_02220)439736..440614-879WP_112741796.1uroporphyrinogen-III synthase-
LP098_RS02240 (LP098_02225)440660..441601-942WP_078275181.1hydroxymethylbilane synthase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

PIN domain

(3-122)

Antitoxin

SpoVT-AbrB domain

(10-50)


Sequences

Toxin        


Download         Length: 131 a.a.        Molecular weight: 14689.79 Da        Isoelectric Point: 4.7370

>T226180 WP_078275188.1 NZ_CP087798:436301-436693 [Moraxella bovis]
MKYLLDTNAVIAILNASERFLTTLERHKEREIAISSIVLSELYYGAYKSQKTAQNLEKINLLPFEVLQFNSQDADKAGEI
GATLERRGTPIGFYDTLIAGQAIANDLIVITDNVREFLRVDGLQIENWLK

Download         Length: 393 bp

>T226180 NZ_CP087798:436301-436693 [Moraxella bovis]
ATGAAATATTTGCTGGACACCAATGCAGTCATTGCGATTTTGAATGCCAGTGAACGATTTTTGACCACGCTAGAACGGCA
TAAAGAGCGTGAAATTGCCATCTCGTCAATTGTTTTGTCGGAGCTGTATTATGGGGCGTACAAAAGCCAAAAAACCGCCC
AAAACCTTGAAAAAATCAATCTACTACCCTTTGAAGTGTTGCAATTTAATTCACAGGACGCTGATAAGGCTGGCGAAATT
GGTGCAACCCTAGAAAGGCGTGGCACACCCATTGGTTTTTATGACACGCTGATTGCAGGGCAAGCGATTGCCAATGATTT
GATTGTTATTACTGACAATGTGCGAGAATTTCTCCGAGTGGACGGTTTGCAAATTGAAAATTGGTTAAAATAA

Antitoxin


Download         Length: 88 a.a.        Molecular weight: 10153.49 Da        Isoelectric Point: 6.3724

>AT226180 WP_264675982.1 NZ_CP087798:436041-436304 [Moraxella bovis]
MRQTATAKLFWTGNSQAVRLPKAFRFEGTEVRIKKQGRQVIIEPAETQDWAWLDKLRAMPKDDSFEEAILEGRQNLKADE
RDWGAFE

Download         Length: 264 bp

>AT226180 NZ_CP087798:436041-436304 [Moraxella bovis]
ATGCGCCAAACTGCCACCGCAAAATTATTTTGGACTGGCAACAGTCAAGCCGTTCGCTTACCCAAAGCCTTTCGTTTTGA
AGGCACGGAAGTGCGTATCAAAAAACAAGGACGACAAGTGATTATTGAGCCAGCAGAGACCCAAGATTGGGCGTGGCTGG
ACAAATTGCGAGCAATGCCAAAAGATGACAGTTTTGAAGAAGCCATTTTGGAAGGTCGCCAAAATTTAAAAGCCGATGAA
CGAGATTGGGGTGCATTTGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References