Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) relBE/YafQ-RelB
Location 358957..359515 Replicon chromosome
Accession NZ_CP087796
Organism Moraxella bovis strain SAM57957

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag LP101_RS01630 Protein ID WP_228157760.1
Coordinates 359243..359515 (+) Length 91 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag LP101_RS01625 Protein ID WP_264677330.1
Coordinates 358957..359250 (+) Length 98 a.a.

Genomic Context


LP101_RS01605LP101_RS01610LP101_RS01615LP101_RS01620LP101_RS01625LP101_RS01630LP101_RS01640LP101_RS01645LP101_RS01650LP101_RS01655LP101_RS01660LP101_RS01665LP101_RS01600LP101_RS01635LP101_RS01670LP101_RS01675
Location: 356098..356709 (612 bp)
Type: Others
Protein ID: WP_115368690.1
Location: 356816..357166 (351 bp)
Type: Others
Protein ID: WP_181879486.1
Location: 357156..357359 (204 bp)
Type: Others
Protein ID: WP_115368689.1
Location: 357479..358813 (1335 bp)
Type: Others
Protein ID: WP_264677331.1
Location: 358957..359250 (294 bp)
Type: Antitoxin
Protein ID: WP_264677330.1
Location: 359243..359515 (273 bp)
Type: Toxin
Protein ID: WP_228157760.1
Location: 360095..360364 (270 bp)
Type: Others
Protein ID: WP_264677328.1
Location: 360361..360741 (381 bp)
Type: Others
Protein ID: WP_264677327.1
Location: 360738..361997 (1260 bp)
Type: Others
Protein ID: WP_264677326.1
Location: 362077..362340 (264 bp)
Type: Others
Protein ID: WP_264675982.1
Location: 362337..362729 (393 bp)
Type: Others
Protein ID: WP_264677325.1
Location: 362852..363382 (531 bp)
Type: Others
Protein ID: WP_264678418.1
Location: 354673..355977 (1305 bp)
Type: Others
Protein ID: WP_264677332.1
Location: 359580..360035 (456 bp)
Type: Others
Protein ID: WP_264677329.1
Location: 363379..363945 (567 bp)
Type: Others
Protein ID: WP_078275186.1
Location: 363948..364184 (237 bp)
Type: Others
Protein ID: WP_078275185.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
LP101_RS01600 (LP101_01570)354673..355977-1305WP_264677332.1valine--pyruvate transaminase-
LP101_RS01605 (LP101_01575)356098..356709+612WP_115368690.1methyltransferase-
LP101_RS01610 (LP101_01580)356816..357166+351WP_181879486.1PIN domain protein-
LP101_RS01615 (LP101_01585)357156..357359+204WP_115368689.1hypothetical protein-
LP101_RS01620 (LP101_01590)357479..358813+1335WP_264677331.1deoxyguanosinetriphosphate triphosphohydrolase-
LP101_RS01625 (LP101_01595)358957..359250+294WP_264677330.1type II toxin-antitoxin system RelB/DinJ family antitoxinAntitoxin
LP101_RS01630 (LP101_01600)359243..359515+273WP_228157760.1type II toxin-antitoxin system YafQ family toxinToxin
LP101_RS01635 (LP101_01605)359580..360035-456WP_264677329.1type IV secretion protein Rhs-
LP101_RS01640 (LP101_01610)360095..360364+270WP_264677328.1hypothetical protein-
LP101_RS01645 (LP101_01615)360361..360741+381WP_264677327.1type II toxin-antitoxin system VapC family toxin-
LP101_RS01650 (LP101_01620)360738..361997+1260WP_264677326.1replication-associated recombination protein A-
LP101_RS01655 (LP101_01625)362077..362340+264WP_264675982.1type II toxin-antitoxin system VapB family antitoxin-
LP101_RS01660 (LP101_01630)362337..362729+393WP_264677325.1type II toxin-antitoxin system VapC family toxin-
LP101_RS01665 (LP101_01635)362852..363382+531WP_264678418.1glucose-6-phosphate 1-dehydrogenase family protein-
LP101_RS01670 (LP101_01640)363379..363945-567WP_078275186.1hypothetical protein-
LP101_RS01675 (LP101_01645)363948..364184-237WP_078275185.1sulfurtransferase TusA-

Associated MGEs


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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(6-90)

Antitoxin

(7-52)


Sequences


Toxin        


Download         Length: 91 a.a.        Molecular weight: 10415.99 Da        Isoelectric Point: 6.9668

>T226170 WP_228157760.1 NZ_CP087796:359243-359515 [Moraxella bovis]
VAKRSFEMGNPFKRDLKKHYLALIGEAWTEVSDCLLNAKPIPQKYQDHPLQGDWVGFRDCHIKPDLVLIYKINDEAVELH
RLATHSELFG

Download         Length: 273 bp

>T226170 NZ_CP122317:40796-40972 [Escherichia coli]
GTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAG
GTTTCATGGGAGGCGCAGTGTCATGCCGCGTCACCCCTGCGATGAGATTAAAGAACCATTGCGTAAAGCAATCCTGAAAC
AACTCGGTTTGAGTTAA

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 11096.37 Da        Isoelectric Point: 4.7769

>AT226170 WP_264677330.1 NZ_CP087796:358957-359250 [Moraxella bovis]
MSHTNFNMRLDNDLRQKVYPVLEQYGLTPSQAVRMFFNQIAQTGKVPLSFDWGQSHTLSSNGEKLLRESIQAFENGETER
FDSLDELNQAMAEIARG

Download         Length: 294 bp

>AT226170 NZ_CP122317:41018-41434 [Escherichia coli]
ATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTTTTGTGGATATCCCTGAAGCGTTGAC
CCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATA
ACGAGCTTATCCCTTTACCTTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCCTCTAAGGTA
TTGCTGTTAAATGCTTTTTTACAGTCAGAAATCACTCAGCAAGAGTTAGCCAGGCGAATTGGCAAACCTAAACAGGAGAT
TACTCGCCTATTTAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTAT
CGCTGGTGATGGTTTAA

Similar Proteins


Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures


Toxin

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Source
ID
Structure
No matching records found


Antitoxin

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Source
ID
Structure
No matching records found

References