Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/YafQ-RelB |
Location | 358957..359515 | Replicon | chromosome |
Accession | NZ_CP087796 | ||
Organism | Moraxella bovis strain SAM57957 |
Toxin (Protein)
Gene name | relE | Uniprot ID | - |
Locus tag | LP101_RS01630 | Protein ID | WP_228157760.1 |
Coordinates | 359243..359515 (+) | Length | 91 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | LP101_RS01625 | Protein ID | WP_264677330.1 |
Coordinates | 358957..359250 (+) | Length | 98 a.a. |
Genomic Context
Location: 356098..356709 (612 bp)
Type: Others
Protein ID: WP_115368690.1
Type: Others
Protein ID: WP_115368690.1
Location: 356816..357166 (351 bp)
Type: Others
Protein ID: WP_181879486.1
Type: Others
Protein ID: WP_181879486.1
Location: 357156..357359 (204 bp)
Type: Others
Protein ID: WP_115368689.1
Type: Others
Protein ID: WP_115368689.1
Location: 357479..358813 (1335 bp)
Type: Others
Protein ID: WP_264677331.1
Type: Others
Protein ID: WP_264677331.1
Location: 358957..359250 (294 bp)
Type: Antitoxin
Protein ID: WP_264677330.1
Type: Antitoxin
Protein ID: WP_264677330.1
Location: 359243..359515 (273 bp)
Type: Toxin
Protein ID: WP_228157760.1
Type: Toxin
Protein ID: WP_228157760.1
Location: 360095..360364 (270 bp)
Type: Others
Protein ID: WP_264677328.1
Type: Others
Protein ID: WP_264677328.1
Location: 360361..360741 (381 bp)
Type: Others
Protein ID: WP_264677327.1
Type: Others
Protein ID: WP_264677327.1
Location: 360738..361997 (1260 bp)
Type: Others
Protein ID: WP_264677326.1
Type: Others
Protein ID: WP_264677326.1
Location: 362077..362340 (264 bp)
Type: Others
Protein ID: WP_264675982.1
Type: Others
Protein ID: WP_264675982.1
Location: 362337..362729 (393 bp)
Type: Others
Protein ID: WP_264677325.1
Type: Others
Protein ID: WP_264677325.1
Location: 362852..363382 (531 bp)
Type: Others
Protein ID: WP_264678418.1
Type: Others
Protein ID: WP_264678418.1
Location: 354673..355977 (1305 bp)
Type: Others
Protein ID: WP_264677332.1
Type: Others
Protein ID: WP_264677332.1
Location: 359580..360035 (456 bp)
Type: Others
Protein ID: WP_264677329.1
Type: Others
Protein ID: WP_264677329.1
Location: 363379..363945 (567 bp)
Type: Others
Protein ID: WP_078275186.1
Type: Others
Protein ID: WP_078275186.1
Location: 363948..364184 (237 bp)
Type: Others
Protein ID: WP_078275185.1
Type: Others
Protein ID: WP_078275185.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LP101_RS01600 (LP101_01570) | 354673..355977 | - | 1305 | WP_264677332.1 | valine--pyruvate transaminase | - |
LP101_RS01605 (LP101_01575) | 356098..356709 | + | 612 | WP_115368690.1 | methyltransferase | - |
LP101_RS01610 (LP101_01580) | 356816..357166 | + | 351 | WP_181879486.1 | PIN domain protein | - |
LP101_RS01615 (LP101_01585) | 357156..357359 | + | 204 | WP_115368689.1 | hypothetical protein | - |
LP101_RS01620 (LP101_01590) | 357479..358813 | + | 1335 | WP_264677331.1 | deoxyguanosinetriphosphate triphosphohydrolase | - |
LP101_RS01625 (LP101_01595) | 358957..359250 | + | 294 | WP_264677330.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
LP101_RS01630 (LP101_01600) | 359243..359515 | + | 273 | WP_228157760.1 | type II toxin-antitoxin system YafQ family toxin | Toxin |
LP101_RS01635 (LP101_01605) | 359580..360035 | - | 456 | WP_264677329.1 | type IV secretion protein Rhs | - |
LP101_RS01640 (LP101_01610) | 360095..360364 | + | 270 | WP_264677328.1 | hypothetical protein | - |
LP101_RS01645 (LP101_01615) | 360361..360741 | + | 381 | WP_264677327.1 | type II toxin-antitoxin system VapC family toxin | - |
LP101_RS01650 (LP101_01620) | 360738..361997 | + | 1260 | WP_264677326.1 | replication-associated recombination protein A | - |
LP101_RS01655 (LP101_01625) | 362077..362340 | + | 264 | WP_264675982.1 | type II toxin-antitoxin system VapB family antitoxin | - |
LP101_RS01660 (LP101_01630) | 362337..362729 | + | 393 | WP_264677325.1 | type II toxin-antitoxin system VapC family toxin | - |
LP101_RS01665 (LP101_01635) | 362852..363382 | + | 531 | WP_264678418.1 | glucose-6-phosphate 1-dehydrogenase family protein | - |
LP101_RS01670 (LP101_01640) | 363379..363945 | - | 567 | WP_078275186.1 | hypothetical protein | - |
LP101_RS01675 (LP101_01645) | 363948..364184 | - | 237 | WP_078275185.1 | sulfurtransferase TusA | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
No matching records found |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 91 a.a. Molecular weight: 10415.99 Da Isoelectric Point: 6.9668
>T226170 WP_228157760.1 NZ_CP087796:359243-359515 [Moraxella bovis]
VAKRSFEMGNPFKRDLKKHYLALIGEAWTEVSDCLLNAKPIPQKYQDHPLQGDWVGFRDCHIKPDLVLIYKINDEAVELH
RLATHSELFG
VAKRSFEMGNPFKRDLKKHYLALIGEAWTEVSDCLLNAKPIPQKYQDHPLQGDWVGFRDCHIKPDLVLIYKINDEAVELH
RLATHSELFG
Download Length: 273 bp
>T226170 NZ_CP122317:40796-40972 [Escherichia coli]
GTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAG
GTTTCATGGGAGGCGCAGTGTCATGCCGCGTCACCCCTGCGATGAGATTAAAGAACCATTGCGTAAAGCAATCCTGAAAC
AACTCGGTTTGAGTTAA
GTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAG
GTTTCATGGGAGGCGCAGTGTCATGCCGCGTCACCCCTGCGATGAGATTAAAGAACCATTGCGTAAAGCAATCCTGAAAC
AACTCGGTTTGAGTTAA
Antitoxin
Download Length: 98 a.a. Molecular weight: 11096.37 Da Isoelectric Point: 4.7769
>AT226170 WP_264677330.1 NZ_CP087796:358957-359250 [Moraxella bovis]
MSHTNFNMRLDNDLRQKVYPVLEQYGLTPSQAVRMFFNQIAQTGKVPLSFDWGQSHTLSSNGEKLLRESIQAFENGETER
FDSLDELNQAMAEIARG
MSHTNFNMRLDNDLRQKVYPVLEQYGLTPSQAVRMFFNQIAQTGKVPLSFDWGQSHTLSSNGEKLLRESIQAFENGETER
FDSLDELNQAMAEIARG
Download Length: 294 bp
>AT226170 NZ_CP122317:41018-41434 [Escherichia coli]
ATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTTTTGTGGATATCCCTGAAGCGTTGAC
CCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATA
ACGAGCTTATCCCTTTACCTTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCCTCTAAGGTA
TTGCTGTTAAATGCTTTTTTACAGTCAGAAATCACTCAGCAAGAGTTAGCCAGGCGAATTGGCAAACCTAAACAGGAGAT
TACTCGCCTATTTAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTAT
CGCTGGTGATGGTTTAA
ATGCGTTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTTTTGTGGATATCCCTGAAGCGTTGAC
CCAGGGCGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATA
ACGAGCTTATCCCTTTACCTTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCCTCTAAGGTA
TTGCTGTTAAATGCTTTTTTACAGTCAGAAATCACTCAGCAAGAGTTAGCCAGGCGAATTGGCAAACCTAAACAGGAGAT
TACTCGCCTATTTAACTTGCATCATGCGACAAAAATCGACGCCGTCCAGCTCGCGGCAAAGGCGCTTGGCAAAGAGTTAT
CGCTGGTGATGGTTTAA