Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/ParE-RelB
Location 1985742..1986319 Replicon chromosome
Accession NZ_CP087784
Organism Moraxella bovis strain SAM57973

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag LP100_RS10000 Protein ID WP_078275234.1
Coordinates 1985742..1986077 (-) Length 112 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag LP100_RS10005 Protein ID WP_078275235.1
Coordinates 1986077..1986319 (-) Length 81 a.a.

Genomic Context

LP100_RS09975LP100_RS09980LP100_RS09985LP100_RS10010LP100_RS10020LP100_RS10025LP100_RS10030LP100_RS09990LP100_RS09995LP100_RS10000LP100_RS10005LP100_RS10015
Location: 1981082..1981282 (201 bp)
Type: Others
Protein ID: WP_112741955.1
Location: 1981442..1982026 (585 bp)
Type: Others
Protein ID: WP_112741954.1
Location: 1982191..1984335 (2145 bp)
Type: Others
Protein ID: WP_264676147.1
Location: 1986526..1987605 (1080 bp)
Type: Others
Protein ID: WP_029103111.1
Location: 1988898..1989524 (627 bp)
Type: Others
Protein ID: WP_078275237.1
Location: 1989684..1989989 (306 bp)
Type: Others
Protein ID: WP_078275238.1
Location: 1989998..1990420 (423 bp)
Type: Others
Protein ID: WP_078275239.1
Location: 1984425..1984613 (189 bp)
Type: Others
Protein ID: WP_143821748.1
Location: 1984685..1985680 (996 bp)
Type: Others
Protein ID: WP_208624081.1
Location: 1985742..1986077 (336 bp)
Type: Toxin
Protein ID: WP_078275234.1
Location: 1986077..1986319 (243 bp)
Type: Antitoxin
Protein ID: WP_078275235.1
Location: 1987987..1988709 (723 bp)
Type: Others
Protein ID: WP_078275236.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
LP100_RS09975 (LP100_09880)1981082..1981282+201WP_112741955.1hypothetical protein-
LP100_RS09980 (LP100_09885)1981442..1982026+585WP_112741954.1hypothetical protein-
LP100_RS09985 (LP100_09890)1982191..1984335+2145WP_264676147.1cation-translocating P-type ATPase-
LP100_RS09990 (LP100_09895)1984425..1984613-189WP_143821748.1hypothetical protein-
LP100_RS09995 (LP100_09900)1984685..1985680-996WP_208624081.1polyprenyl synthetase family protein-
LP100_RS10000 (LP100_09905)1985742..1986077-336WP_078275234.1type II toxin-antitoxin system RelE/ParE family toxinToxin
LP100_RS10005 (LP100_09910)1986077..1986319-243WP_078275235.1type II toxin-antitoxin system RelB/DinJ family antitoxinAntitoxin
LP100_RS10010 (LP100_09915)1986526..1987605+1080WP_029103111.13-deoxy-7-phosphoheptulonate synthase-
LP100_RS10015 (LP100_09920)1987987..1988709-723WP_078275236.1tRNA pseudouridine(65) synthase TruC-
LP100_RS10020 (LP100_09925)1988898..1989524+627WP_078275237.1septation protein IspZ-
LP100_RS10025 (LP100_09930)1989684..1989989+306WP_078275238.1YciI family protein-
LP100_RS10030 (LP100_09935)1989998..1990420+423WP_078275239.1hypothetical protein-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(8-84)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(2-63)


Sequences

Toxin        


Download         Length: 112 a.a.        Molecular weight: 13059.98 Da        Isoelectric Point: 8.8194

>T226146 WP_078275234.1 NZ_CP087784:c1986077-1985742 [Moraxella bovis]
MCELMYELEFDERALKEWQKLGDTIKTQFKKRLAKVLKNPHIIANRLSGGQNLYKINFRSAGYRLVYQVEDDKVVVFVIV
MGKREKNAVYDTAEEWLAERQSDNQDTQSVK

Download         Length: 336 bp

>T226146 NZ_CP122316:c116280-115207 [Escherichia coli]
ATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCAAATATCGAGACTGAATCCAGACAATTCATTGAAAATAA
AAACTATTCAATCCAATCAATTGGTCCTATGCCAGGGTCAAGGGCTGGGCTTCGGGTCGTATTTACCAGACCAGGGGTTA
ACTTGGCAACTGTGGACATTTTTTATAACGGGGACGGTTCGACTACAATTCAATATCTCACTGGAGCCAATCGTTCTCTG
GGCCAAGAGTTAGCGGATCATCTTTTTGAAACCATCAATCCTGCTGAATTTGAGCAGGTAAATATGGTACTGCAAGGATT
TGTAGAGACAAGCGTTCTACCTGTACTTGAGCTATCAGCAGATGAATCGCATATAGAGTTCAGAGAACACTCTCGTAACG
CTCATACCGTAGTGTGGAAAATTATTTCCACCAGCTATCAGGACGAATTGACTGTGAGCCTGCATATCACAACAGGTAAG
CTCCAGATTCAGGGCCGACCGCTGTCATGTTACAGAGTTTTCACGTTTAACTTGGCAGCCCTGCTTGATTTACAGGGTTT
GGAGAAAGTGCTAATCCGCCAGGAGGATGGTAAAGCTAATATTGTTCAACAGGAGGTTGCCCGCACTTACTTGCAGACTG
TAATGGCCGATGCTTACCCGCATCTCCACGTGACTGCCGAAAAATTGCTCGTTTCAGGGCTATGTGTTAAACTCGCCGCC
CCTGATTTGCCTGACTACTGTATGTTACTTTATCCTGAACTACGCACCATTGAAGGTGTCTTAAAAAGTAAGATGAGTGG
GTTAGGCATGCCAGTACAGCAGCCGGCAGGTTTTGGAACTTACTTTGATAAACCTGCTGCTCATTACATTCTGAAACCGC
AATTTGCAGCTACTCTTAGACCGGAACAGATTAACATCATCAGCACAGCCTATACTTTTTTTAATGTGGAACGTCATTCT
CTGTTCCACATGGAAACTGTGGTCGATGCCAGCCGTATGATTTCTGATATGGCCCGGTTGATGGGTAAAGCCACTAGAGC
GTGGGGAATAATCAAGGACTTATATATTGTTTGA

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9034.47 Da        Isoelectric Point: 4.7527

>AT226146 WP_078275235.1 NZ_CP087784:c1986319-1986077 [Moraxella bovis]
MANIVARVDDDLKAQSFLVLQELGVTPSELIRQTLQYVAYHKKLPFKTVVLTDEDSELLALAKERLDNPAPRIKVSLDEL

Download         Length: 243 bp

>AT226146 NZ_CP122316:c115214-114843 [Escherichia coli]
TTGTTTGAAATCACCGGAATTAACGTCTCAGGGGCTCTAAAAGCTGTCGTTATGGCGACCGGCTTCGAGAACCCTTTGTC
CTCAGTTAATGAAATTGAGACGAAACTTTCTGCCCTACTGGGTAGTGAGACCACTGGTGAAATCCTTTTTGACCTCTTGT
GCGCTAACGGTCCAGAGTGGAACCGCTTCGTTACGCTGGAAATGAAATATGGCCGGATCATGCTGGATACGGCCAAAATT
ATTGATGAGCAGGACGTTCCGACACATATCCTGAGCAAACTGACTTTTACTTTACGTAATCATCCTGAGTACCTAGAAGC
CTCTGTTTTGTCTCCCGATGATGTACGCCAAGTCCTGTCAATGGATTTTTGA

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References