Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | vapBC/VapC-VagC |
| Location | 2102669..2103318 | Replicon | chromosome |
| Accession | NZ_CP087771 | ||
| Organism | Moraxella bovis strain SAM109244 | ||
Toxin (Protein)
| Gene name | vapC | Uniprot ID | - |
| Locus tag | LP127_RS10630 | Protein ID | WP_078274052.1 |
| Coordinates | 2102669..2103070 (-) | Length | 134 a.a. |
Antitoxin (Protein)
| Gene name | vapB | Uniprot ID | - |
| Locus tag | LP127_RS10635 | Protein ID | WP_112741908.1 |
| Coordinates | 2103085..2103318 (-) | Length | 78 a.a. |
Genomic Context
Location: 2098325..2098558 (234 bp)
Type: Others
Protein ID: WP_112741910.1
Type: Others
Protein ID: WP_112741910.1
Location: 2098604..2098753 (150 bp)
Type: Others
Protein ID: WP_162860355.1
Type: Others
Protein ID: WP_162860355.1
Location: 2098750..2099169 (420 bp)
Type: Others
Protein ID: WP_078274047.1
Type: Others
Protein ID: WP_078274047.1
Location: 2099905..2100594 (690 bp)
Type: Others
Protein ID: WP_078274049.1
Type: Others
Protein ID: WP_078274049.1
Location: 2105686..2106279 (594 bp)
Type: Others
Protein ID: WP_208624078.1
Type: Others
Protein ID: WP_208624078.1
Location: 2106299..2107291 (993 bp)
Type: Others
Protein ID: WP_078274055.1
Type: Others
Protein ID: WP_078274055.1
Location: 2107473..2107922 (450 bp)
Type: Others
Protein ID: WP_264676133.1
Type: Others
Protein ID: WP_264676133.1
Location: 2100693..2101523 (831 bp)
Type: Others
Protein ID: WP_078274050.1
Type: Others
Protein ID: WP_078274050.1
Location: 2101645..2102145 (501 bp)
Type: Others
Protein ID: WP_112741909.1
Type: Others
Protein ID: WP_112741909.1
Location: 2102669..2103070 (402 bp)
Type: Toxin
Protein ID: WP_078274052.1
Type: Toxin
Protein ID: WP_078274052.1
Location: 2103085..2103318 (234 bp)
Type: Antitoxin
Protein ID: WP_112741908.1
Type: Antitoxin
Protein ID: WP_112741908.1
Location: 2103366..2105465 (2100 bp)
Type: Others
Protein ID: WP_078274054.1
Type: Others
Protein ID: WP_078274054.1
Loading, please wait
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP127_RS10595 (LP127_10500) | 2098325..2098558 | + | 234 | WP_112741910.1 | ASCH domain-containing protein | - |
| LP127_RS10600 (LP127_10505) | 2098604..2098753 | + | 150 | WP_162860355.1 | hypothetical protein | - |
| LP127_RS10605 (LP127_10510) | 2098750..2099169 | + | 420 | WP_078274047.1 | S4 domain-containing protein | - |
| LP127_RS10615 (LP127_10520) | 2099905..2100594 | + | 690 | WP_078274049.1 | SIMPL domain-containing protein | - |
| LP127_RS10620 (LP127_10525) | 2100693..2101523 | - | 831 | WP_078274050.1 | inositol monophosphatase family protein | - |
| LP127_RS10625 (LP127_10530) | 2101645..2102145 | - | 501 | WP_112741909.1 | WG repeat-containing protein | - |
| LP127_RS10630 (LP127_10535) | 2102669..2103070 | - | 402 | WP_078274052.1 | type II toxin-antitoxin system VapC family toxin | Toxin |
| LP127_RS10635 (LP127_10540) | 2103085..2103318 | - | 234 | WP_112741908.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin |
| LP127_RS10640 (LP127_10545) | 2103366..2105465 | - | 2100 | WP_078274054.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| LP127_RS10645 (LP127_10550) | 2105686..2106279 | + | 594 | WP_208624078.1 | GTP cyclohydrolase II | - |
| LP127_RS10650 (LP127_10555) | 2106299..2107291 | + | 993 | WP_078274055.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| LP127_RS10655 (LP127_10560) | 2107473..2107922 | + | 450 | WP_264676133.1 | cytochrome c | - |
Associated MGEs
Loading, please wait
MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 134 a.a. Molecular weight: 15131.33 Da Isoelectric Point: 6.8510
>T226125 WP_078274052.1 NZ_CP087771:c2103070-2102669 [Moraxella bovis]
MFSFMLDTNIYIYVIKERPIKALNKFNQYAGRICVSSIVASELYFGAYNSQFMDKNLHQVEDFLSRLTVLDYTAECSPHY
GEICADLTKQGKLISENDIHIASHARALGLTLITNNTDEFKRVSGLRIGNWAI
MFSFMLDTNIYIYVIKERPIKALNKFNQYAGRICVSSIVASELYFGAYNSQFMDKNLHQVEDFLSRLTVLDYTAECSPHY
GEICADLTKQGKLISENDIHIASHARALGLTLITNNTDEFKRVSGLRIGNWAI
Download Length: 402 bp
>T226125 NZ_CP122315:1842478-1842696 [Escherichia coli]
ATGTCCGAAAAACCTTTAACGAAAACCGATTATTTAATGCGTTTACGTCGTTGCCAGACAATTGACACGCTGGAGCGTGT
TATCGAGAAAAATAAATACGAATTATCAGATAATGAACTGGCGGTATTTTACTCAGCCGCAGATCACCGCCTCGCCGAAT
TGACCATGAATAAACTGTACGACAAGATCCCTTCCTCAGTATGGAAATTTATTCGCTAA
ATGTCCGAAAAACCTTTAACGAAAACCGATTATTTAATGCGTTTACGTCGTTGCCAGACAATTGACACGCTGGAGCGTGT
TATCGAGAAAAATAAATACGAATTATCAGATAATGAACTGGCGGTATTTTACTCAGCCGCAGATCACCGCCTCGCCGAAT
TGACCATGAATAAACTGTACGACAAGATCCCTTCCTCAGTATGGAAATTTATTCGCTAA
Antitoxin
Download Length: 78 a.a. Molecular weight: 8990.22 Da Isoelectric Point: 6.2884
>AT226125 WP_112741908.1 NZ_CP087771:c2103318-2103085 [Moraxella bovis]
MQTSVFFNNRTQAVRIPAKFRFDDDVKAVMIRKVGNERILTPIDGVWDSFFLSDERASDDFMANRPTMPKSERLTFD
MQTSVFFNNRTQAVRIPAKFRFDDDVKAVMIRKVGNERILTPIDGVWDSFFLSDERASDDFMANRPTMPKSERLTFD
Download Length: 234 bp
>AT226125 NZ_CP122315:1842078-1842452 [Escherichia coli]
ATGGATGAATACTCACCCAAAAGACATGATATCGCACAGCTTAAGTTTCTCTGTGAAACCCTGTATCATGACTGCCTTGC
AAACCTTGAAGAAAGCAATCATGGCTGGGTAAACGACCCAACCTCGGCGATCAACCTCCAGTTGAATGAACTGATTGAGC
ATATTGCGACCTTCGCACTTAATTACAAAATTAAGTATAATGAAGACAATAAGCTCATTGAGCAGATCGACGAATATCTG
GATGACACCTTTATGTTGTTCAGTAGTTATGGTATTAATATGCAGGATCTTCAGAAATGGCGGAAGTCAGGTAATCGACT
ATTCCGTTGTTTTGTCAATGCGACGAAAGAGAATCCTGCGAGTTTATCTTGTTAG
ATGGATGAATACTCACCCAAAAGACATGATATCGCACAGCTTAAGTTTCTCTGTGAAACCCTGTATCATGACTGCCTTGC
AAACCTTGAAGAAAGCAATCATGGCTGGGTAAACGACCCAACCTCGGCGATCAACCTCCAGTTGAATGAACTGATTGAGC
ATATTGCGACCTTCGCACTTAATTACAAAATTAAGTATAATGAAGACAATAAGCTCATTGAGCAGATCGACGAATATCTG
GATGACACCTTTATGTTGTTCAGTAGTTATGGTATTAATATGCAGGATCTTCAGAAATGGCGGAAGTCAGGTAATCGACT
ATTCCGTTGTTTTGTCAATGCGACGAAAGAGAATCCTGCGAGTTTATCTTGTTAG