Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | vapBC/VapC-VagC |
| Location | 36786..37462 | Replicon | chromosome |
| Accession | NZ_CP087765 | ||
| Organism | Moraxella bovis strain SAM109246 | ||
Toxin (Protein)
| Gene name | vapC | Uniprot ID | - |
| Locus tag | LP096_RS00195 | Protein ID | WP_078274052.1 |
| Coordinates | 37061..37462 (+) | Length | 134 a.a. |
Antitoxin (Protein)
| Gene name | vapB | Uniprot ID | - |
| Locus tag | LP096_RS00190 | Protein ID | WP_264689314.1 |
| Coordinates | 36786..37046 (+) | Length | 87 a.a. |
Genomic Context
Location: 34667..36766 (2100 bp)
Type: Others
Protein ID: WP_078274054.1
Type: Others
Protein ID: WP_078274054.1
Location: 36786..37046 (261 bp)
Type: Antitoxin
Protein ID: WP_264689314.1
Type: Antitoxin
Protein ID: WP_264689314.1
Location: 37061..37462 (402 bp)
Type: Toxin
Protein ID: WP_078274052.1
Type: Toxin
Protein ID: WP_078274052.1
Location: 37986..38486 (501 bp)
Type: Others
Protein ID: WP_112741909.1
Type: Others
Protein ID: WP_112741909.1
Location: 38608..39438 (831 bp)
Type: Others
Protein ID: WP_078274050.1
Type: Others
Protein ID: WP_078274050.1
Location: 32210..32659 (450 bp)
Type: Others
Protein ID: WP_264676133.1
Type: Others
Protein ID: WP_264676133.1
Location: 32841..33833 (993 bp)
Type: Others
Protein ID: WP_078274055.1
Type: Others
Protein ID: WP_078274055.1
Location: 33853..34446 (594 bp)
Type: Others
Protein ID: WP_208624078.1
Type: Others
Protein ID: WP_208624078.1
Location: 39537..40226 (690 bp)
Type: Others
Protein ID: WP_078274049.1
Type: Others
Protein ID: WP_078274049.1
Location: 40962..41381 (420 bp)
Type: Others
Protein ID: WP_078274047.1
Type: Others
Protein ID: WP_078274047.1
Location: 41378..41554 (177 bp)
Type: Others
Protein ID: WP_228157829.1
Type: Others
Protein ID: WP_228157829.1
Location: 41573..41806 (234 bp)
Type: Others
Protein ID: WP_112741910.1
Type: Others
Protein ID: WP_112741910.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP096_RS00170 (LP096_00170) | 32210..32659 | - | 450 | WP_264676133.1 | cytochrome c | - |
| LP096_RS00175 (LP096_00175) | 32841..33833 | - | 993 | WP_078274055.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| LP096_RS00180 (LP096_00180) | 33853..34446 | - | 594 | WP_208624078.1 | GTP cyclohydrolase II | - |
| LP096_RS00185 (LP096_00185) | 34667..36766 | + | 2100 | WP_078274054.1 | 1-deoxy-D-xylulose-5-phosphate synthase | - |
| LP096_RS00190 (LP096_00190) | 36786..37046 | + | 261 | WP_264689314.1 | antitoxin | Antitoxin |
| LP096_RS00195 (LP096_00195) | 37061..37462 | + | 402 | WP_078274052.1 | type II toxin-antitoxin system VapC family toxin | Toxin |
| LP096_RS00200 (LP096_00200) | 37986..38486 | + | 501 | WP_112741909.1 | WG repeat-containing protein | - |
| LP096_RS00205 (LP096_00205) | 38608..39438 | + | 831 | WP_078274050.1 | inositol monophosphatase family protein | - |
| LP096_RS00210 (LP096_00210) | 39537..40226 | - | 690 | WP_078274049.1 | SIMPL domain-containing protein | - |
| LP096_RS00220 (LP096_00220) | 40962..41381 | - | 420 | WP_078274047.1 | S4 domain-containing protein | - |
| LP096_RS00225 (LP096_00225) | 41378..41554 | - | 177 | WP_228157829.1 | ASCH domain-containing protein | - |
| LP096_RS00230 (LP096_00230) | 41573..41806 | - | 234 | WP_112741910.1 | ASCH domain-containing protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 134 a.a. Molecular weight: 15131.33 Da Isoelectric Point: 6.8510
>T226096 WP_078274052.1 NZ_CP087765:37061-37462 [Moraxella bovis]
MFSFMLDTNIYIYVIKERPIKALNKFNQYAGRICVSSIVASELYFGAYNSQFMDKNLHQVEDFLSRLTVLDYTAECSPHY
GEICADLTKQGKLISENDIHIASHARALGLTLITNNTDEFKRVSGLRIGNWAI
MFSFMLDTNIYIYVIKERPIKALNKFNQYAGRICVSSIVASELYFGAYNSQFMDKNLHQVEDFLSRLTVLDYTAECSPHY
GEICADLTKQGKLISENDIHIASHARALGLTLITNNTDEFKRVSGLRIGNWAI
Download Length: 402 bp
>T226096 NZ_CP121861:2134909-2135085 [Bacillus stercoris]
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGATAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCA
AACGTATACGCAGATGA
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGATAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCA
AACGTATACGCAGATGA
Antitoxin
Download Length: 87 a.a. Molecular weight: 10013.39 Da Isoelectric Point: 5.8079
>AT226096 WP_264689314.1 NZ_CP087765:36786-37046 [Moraxella bovis]
MSYTLMGECHANQCFFNNRTQAVRIPAKFRFDDDVKAVMIRKVGNERILTPIDGVWDSFFLSDERASDDFMANRPTMPKS
ERLTFD
MSYTLMGECHANQCFFNNRTQAVRIPAKFRFDDDVKAVMIRKVGNERILTPIDGVWDSFFLSDERASDDFMANRPTMPKS
ERLTFD
Download Length: 261 bp
>AT226096 NZ_CP121861:c2135126-2135026 [Bacillus stercoris]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCTGCGTATACGTTTGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCTGCGTATACGTTTGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT