Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mazEF/MazF(toxin) |
| Location | 487187..487824 | Replicon | chromosome |
| Accession | NZ_CP087391 | ||
| Organism | Bacillus amyloliquefaciens strain ZF57 | ||
Toxin (Protein)
| Gene name | mazF | Uniprot ID | G4NU33 |
| Locus tag | LOZ87_RS02485 | Protein ID | WP_003156187.1 |
| Coordinates | 487474..487824 (+) | Length | 117 a.a. |
Antitoxin (Protein)
| Gene name | mazE | Uniprot ID | I2HMS5 |
| Locus tag | LOZ87_RS02480 | Protein ID | WP_003156188.1 |
| Coordinates | 487187..487468 (+) | Length | 94 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOZ87_RS02460 (LOZ87_02460) | 483552..484151 | - | 600 | WP_020953896.1 | rhomboid family intramembrane serine protease | - |
| LOZ87_RS02465 (LOZ87_02465) | 484244..484609 | + | 366 | WP_007410229.1 | holo-ACP synthase | - |
| LOZ87_RS02470 (LOZ87_02470) | 484774..485781 | + | 1008 | WP_007410230.1 | outer membrane lipoprotein carrier protein LolA | - |
| LOZ87_RS02475 (LOZ87_02475) | 485898..487067 | + | 1170 | WP_039062648.1 | alanine racemase | - |
| LOZ87_RS02480 (LOZ87_02480) | 487187..487468 | + | 282 | WP_003156188.1 | type II toxin-antitoxin system antitoxin EndoAI | Antitoxin |
| LOZ87_RS02485 (LOZ87_02485) | 487474..487824 | + | 351 | WP_003156187.1 | type II toxin-antitoxin system endoribonuclease NdoA | Toxin |
| LOZ87_RS02490 (LOZ87_02490) | 487942..488763 | + | 822 | WP_003156182.1 | STAS domain-containing protein | - |
| LOZ87_RS02495 (LOZ87_02495) | 488768..489133 | + | 366 | WP_003156180.1 | RsbT antagonist protein RsbS | - |
| LOZ87_RS02500 (LOZ87_02500) | 489136..489537 | + | 402 | WP_003156178.1 | anti-sigma regulatory factor | - |
| LOZ87_RS02505 (LOZ87_02505) | 489549..490556 | + | 1008 | WP_007410233.1 | PP2C family protein-serine/threonine phosphatase | - |
| LOZ87_RS02510 (LOZ87_02510) | 490620..490949 | + | 330 | WP_003156176.1 | anti-sigma factor antagonist RsbV | - |
| LOZ87_RS02515 (LOZ87_02515) | 490946..491428 | + | 483 | WP_003156173.1 | anti-sigma B factor RsbW | - |
| LOZ87_RS02520 (LOZ87_02520) | 491394..492182 | + | 789 | WP_003156171.1 | RNA polymerase sigma factor SigB | - |
| LOZ87_RS02525 (LOZ87_02525) | 492182..492784 | + | 603 | WP_007410234.1 | PP2C family serine/threonine-protein phosphatase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 117 a.a. Molecular weight: 12977.98 Da Isoelectric Point: 4.8781
>T225449 WP_003156187.1 NZ_CP087391:487474-487824 [Bacillus amyloliquefaciens]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF
Download Length: 351 bp
>T225449 NZ_CP121149:c4790160-4789849 [Escherichia coli]
ATGCTCTTCATCGAAACGGAAATTTTTACTGAAGATGTTCAAAAACCGCTGACCGACGATGAATTCAGTCGTTTTCAGTT
TTTCCTGGCCTTGAATCCTGACTATGGTGAGGTAATACCTGAAACTGGTGGGTTAAGAAAGGTTCGATGGGTTTCAGGAG
GAAAGGGGAAACGTGCTGGTGTCAGGGTTATTTACTTTCATCAGGTTAAACATTATGAGATCAGATTACTGCTTATTTAT
CGTAAGGGTATTAAAGATGATCTGTCTCCCCAGGAAAAAGCAATGCTCCGGTTGTTAAATACGAGGTGGTAA
ATGCTCTTCATCGAAACGGAAATTTTTACTGAAGATGTTCAAAAACCGCTGACCGACGATGAATTCAGTCGTTTTCAGTT
TTTCCTGGCCTTGAATCCTGACTATGGTGAGGTAATACCTGAAACTGGTGGGTTAAGAAAGGTTCGATGGGTTTCAGGAG
GAAAGGGGAAACGTGCTGGTGTCAGGGTTATTTACTTTCATCAGGTTAAACATTATGAGATCAGATTACTGCTTATTTAT
CGTAAGGGTATTAAAGATGATCTGTCTCCCCAGGAAAAAGCAATGCTCCGGTTGTTAAATACGAGGTGGTAA
Antitoxin
Download Length: 94 a.a. Molecular weight: 10562.92 Da Isoelectric Point: 6.4706
>AT225449 WP_003156188.1 NZ_CP087391:487187-487468 [Bacillus amyloliquefaciens]
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHYAEC
EAETTVERLVSGG
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHYAEC
EAETTVERLVSGG
Download Length: 282 bp
>AT225449 NZ_CP121149:c4789848-4789558 [Escherichia coli]
ATGGATAAGGCACTTTTTGAGCGGTTGACTCACAGCATGGCCCAGATGAATGAAATTATTGAAGGAACGCGACAGCCTTC
GCGGACTTTTGAAGTTGATGCTATGAAAATCAAAGAAATACGCCGCGCTTCAGGGTTGTCACAATCTAAATTTGCCGATC
TTATTTCTGTAAGCGTAGACACGTTGCGTAACTGGGAGCAGGGGCGACGTTCACCGACCGGGCCTGCAAAGGCTTTGCTG
CGAGCGATTGCCAATGATCCGCAACATGTGCTGCAAGCACTTAACCGTTAG
ATGGATAAGGCACTTTTTGAGCGGTTGACTCACAGCATGGCCCAGATGAATGAAATTATTGAAGGAACGCGACAGCCTTC
GCGGACTTTTGAAGTTGATGCTATGAAAATCAAAGAAATACGCCGCGCTTCAGGGTTGTCACAATCTAAATTTGCCGATC
TTATTTCTGTAAGCGTAGACACGTTGCGTAACTGGGAGCAGGGGCGACGTTCACCGACCGGGCCTGCAAAGGCTTTGCTG
CGAGCGATTGCCAATGATCCGCAACATGTGCTGCAAGCACTTAACCGTTAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|