Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) slvAT/RES(toxin)
Location 811572..812302 Replicon chromosome
Accession NZ_CP087181
Organism Pseudomonas sp. B21-031

Toxin (Protein)


Gene name slvT Uniprot ID -
Locus tag LOY53_RS03715 Protein ID WP_252826665.1
Coordinates 811572..811910 (-) Length 113 a.a.

Antitoxin (Protein)


Gene name slvA Uniprot ID -
Locus tag LOY53_RS03720 Protein ID WP_252826666.1
Coordinates 811907..812302 (-) Length 132 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LOY53_RS03695 (LOY53_03695) 806605..807822 - 1218 WP_252826661.1 DUF3422 domain-containing protein -
LOY53_RS03700 (LOY53_03700) 807990..809420 - 1431 WP_252826662.1 aldehyde dehydrogenase family protein -
LOY53_RS03705 (LOY53_03705) 809434..810933 - 1500 WP_252826663.1 cytosine permease -
LOY53_RS03710 (LOY53_03710) 811027..811416 - 390 WP_252826664.1 nuclear transport factor 2 family protein -
LOY53_RS03715 (LOY53_03715) 811572..811910 - 339 WP_252826665.1 RES family NAD+ phosphorylase Toxin
LOY53_RS03720 (LOY53_03720) 811907..812302 - 396 WP_252826666.1 DUF2384 domain-containing protein Antitoxin
LOY53_RS03725 (LOY53_03725) 812462..813481 + 1020 WP_258703616.1 transporter -
LOY53_RS03730 (LOY53_03730) 813572..814192 + 621 WP_027594492.1 isochorismate family cysteine hydrolase YcaC -
LOY53_RS03735 (LOY53_03735) 814431..815249 + 819 WP_252826667.1 polyphosphate kinase 2 -
LOY53_RS03740 (LOY53_03740) 815286..816482 + 1197 WP_252826668.1 monovalent cation:proton antiporter-2 (CPA2) family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(11-110)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 113 a.a.        Molecular weight: 12146.92 Da        Isoelectric Point: 9.4424

>T225025 WP_252826665.1 NZ_CP087181:c811910-811572 [Pseudomonas sp. B21-031]
MKIIAYRNLACYRLHTPKWAIAPMSGAGAATQGGRANRKGLEALYLSLEPATAVAEFQQGSPFLPPGLLVSYSLTLDLVL
YTDQLPAHGSITVNDPRGDLPKDQSSWHRPKS

Download         Length: 339 bp

>T225025 NZ_CP120837:4490189-4490500 [Salmonella enterica subsp. enterica]
GTGCATGTTATCAGCCGAAAACCGTTCAATGAAGCGATGCTCATGTATCCAAACCATGAGCTTGCTCTCACTGAGTTGCT
GAATGTTCTGGAGAAAAAAACACTCACTCAGCCTGAAGAGATGAAGCGGTATATTCCTTCACTGGATAATTTTAAGCACA
GAGATAAATGGTGGGTGATTGATGTTTCTGGTAACAGCCTGAGACTCATTTCCTACATAGATTTCAGGTTACATAAGATA
TTTGTGAAACATATCGTTTCCCATGCCGAATATGACAAACTGACCGCATATGATCGGGGTAATAAAGAATGA

Antitoxin


Download         Length: 132 a.a.        Molecular weight: 14986.05 Da        Isoelectric Point: 5.6928

>AT225025 WP_252826666.1 NZ_CP087181:c812302-811907 [Pseudomonas sp. B21-031]
MASNAVLELHPTTFEGLMEALREVNRVMFSPERFLKVFSMDQQTFAARAHVHRNTVRNAPESEKIQAYIRDAVRVLRALT
DMGTEMTKAIFWFKNEPLSTFDYKTAEEVVSEGRTEQLIAFLQSWEAGAQG

Download         Length: 396 bp

>AT225025 NZ_CP120837:4490497-4490943 [Salmonella enterica subsp. enterica]
ATGAGAACTCATCGTCAGATGGATGCAACCAGCGCAAAAAAGATCGTTGATACCTTCAGCGATGCGGTAAAAAGCGTCCC
ACTGATGGGGGAAGACCGAAATGACAATGAGTATCGCAGGGCACTAGCGCTAGTGGAGTTTCTGGTCGACCACGACGATC
TTGAAAACCCACTATTTGAATTGCTCTGTGCCCGAATCAGTGAATACGAAAAACATGCGCCGGAATTCAAAGCACTCAAC
CAACACCTGGAGAAAACGCCCCCTGGCGTTTCAGTATTGCGAACGCTCATGGATCAATACGGTCTCAAAGCAGCAGATCT
TGCCAACGAACTTGGTTCTAAATCGAACGTCAGCAACATCTTAAATGGCCGCAGAGCACTAACGGTTAATCATATTAAAG
CGCTTACACAACGCTTCAAACTACCAGCAGATGCCTTCATCGAGTAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References