Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | PhoH-LOG/- |
| Location | 1408814..1411137 | Replicon | chromosome |
| Accession | NC_009840 | ||
| Organism | Prochlorococcus marinus str. MIT 9215 | ||
Toxin (Protein)
| Gene name | PhoH | Uniprot ID | A8G6L9 |
| Locus tag | P9215_RS07775 | Protein ID | WP_012008284.1 |
| Coordinates | 1408814..1410205 (+) | Length | 464 a.a. |
Antitoxin (Protein)
| Gene name | LOG | Uniprot ID | A8G6M0 |
| Locus tag | P9215_RS07780 | Protein ID | WP_012008285.1 |
| Coordinates | 1410253..1411137 (+) | Length | 295 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P9215_RS07745 | 1404119..1404595 | - | 477 | WP_012008274.1 | hypothetical protein | - |
| P9215_RS07750 | 1404792..1405172 | + | 381 | WP_012008275.1 | DoxX family protein | - |
| P9215_RS07755 | 1405192..1405395 | - | 204 | WP_041484414.1 | hypothetical protein | - |
| P9215_RS07760 | 1405674..1406060 | + | 387 | WP_041484415.1 | DUF3804 family protein | - |
| P9215_RS07765 | 1407561..1407818 | + | 258 | WP_041484416.1 | hypothetical protein | - |
| P9215_RS10275 | 1408021..1408167 | + | 147 | WP_012008282.1 | hypothetical protein | - |
| P9215_RS07770 | 1408249..1408767 | + | 519 | WP_012008283.1 | hypothetical protein | - |
| P9215_RS07775 | 1408814..1410205 | + | 1392 | WP_012008284.1 | PhoH family protein | Toxin |
| P9215_RS07780 | 1410253..1411137 | + | 885 | WP_012008285.1 | LOG family protein | Antitoxin |
| P9215_RS07785 | 1411404..1411547 | - | 144 | WP_012008286.1 | high light inducible protein | - |
| P9215_RS07790 | 1411547..1411663 | - | 117 | WP_012008287.1 | high light inducible protein | - |
| P9215_RS07795 | 1411972..1412187 | - | 216 | WP_012008289.1 | hypothetical protein | - |
| P9215_RS07800 | 1412539..1412874 | + | 336 | WP_012008290.1 | hypothetical protein | - |
| P9215_RS10280 | 1412901..1413056 | + | 156 | WP_002805975.1 | hypothetical protein | - |
| P9215_RS07805 | 1413053..1413481 | + | 429 | WP_012008291.1 | hypothetical protein | - |
| P9215_RS07810 | 1413817..1414068 | + | 252 | WP_012008292.1 | hypothetical protein | - |
| P9215_RS10285 | 1414109..1414267 | + | 159 | WP_012008293.1 | hypothetical protein | - |
| P9215_RS07820 | 1414490..1414867 | + | 378 | WP_012008294.1 | hypothetical protein | - |
| P9215_RS09935 | 1415071..1415172 | + | 102 | WP_158508104.1 | photosystem I reaction center subunit XII | - |
| P9215_RS07830 | 1415571..1415801 | - | 231 | WP_012008296.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 464 a.a. Molecular weight: 52082.54 Da Isoelectric Point: 8.0787
>T22490 WP_012008284.1 NC_009840:1408814-1410205 [Prochlorococcus marinus str. MIT 9215]
MKKRVIVLDTNVLLHDPESPLHFANENVVIPIQVVEEVDRFKRDPGEKGRNARRFSRLLDSLREKGNLSSGAKINNKFEG
TIKVAFCRKETTDRLPLELNDSSGDNKILAVALEEKNTKILSDFPEVVLISKDTNMRIKADAVGLKAEDYYKDKISLENL
EKGFREISSNSDEINKVQKDGFIYLRDIKSKFEPSLVSNEGVILKDNLKENHTFLTRYNQSEKKLVGLNHLRRSNLGKVK
PKNLEQNFALDLLLDPKVQLVSLVGKAGTGKTLLALAVGLHQVADENIYERLLVSRPPIPLGKELGYLPGSLDEKLAPWM
KPIIDNLDYLTSPKTNKNGEKNDRKERDNHSKNSWEDLRGMGLLEVEAINYIRGRSITNQFILIDEAQNLTPLEVKTIVT
RAGEGTKIVFTGDPNQIDHPYLDSDSNGLTWLAKKLHGQKIIGHITLSQGERSDLAELAADLL
MKKRVIVLDTNVLLHDPESPLHFANENVVIPIQVVEEVDRFKRDPGEKGRNARRFSRLLDSLREKGNLSSGAKINNKFEG
TIKVAFCRKETTDRLPLELNDSSGDNKILAVALEEKNTKILSDFPEVVLISKDTNMRIKADAVGLKAEDYYKDKISLENL
EKGFREISSNSDEINKVQKDGFIYLRDIKSKFEPSLVSNEGVILKDNLKENHTFLTRYNQSEKKLVGLNHLRRSNLGKVK
PKNLEQNFALDLLLDPKVQLVSLVGKAGTGKTLLALAVGLHQVADENIYERLLVSRPPIPLGKELGYLPGSLDEKLAPWM
KPIIDNLDYLTSPKTNKNGEKNDRKERDNHSKNSWEDLRGMGLLEVEAINYIRGRSITNQFILIDEAQNLTPLEVKTIVT
RAGEGTKIVFTGDPNQIDHPYLDSDSNGLTWLAKKLHGQKIIGHITLSQGERSDLAELAADLL
Download Length: 1392 bp
>T22490 NC_009840:1408814-1410205 [Prochlorococcus marinus str. MIT 9215]
ATGAAAAAAAGAGTTATTGTTCTTGACACAAATGTCTTATTACATGATCCAGAATCACCTCTTCATTTTGCTAATGAAAA
TGTTGTAATCCCAATTCAAGTAGTTGAAGAGGTTGATAGATTCAAACGCGATCCTGGAGAGAAAGGTCGCAATGCCAGAA
GATTTTCTAGACTACTAGATAGTCTTCGAGAAAAAGGTAATCTATCTTCAGGTGCAAAAATTAATAATAAATTTGAAGGG
ACAATAAAAGTTGCATTTTGCAGAAAAGAGACAACTGATAGATTGCCCTTAGAACTAAATGATAGTAGTGGAGATAATAA
AATTTTAGCTGTCGCTCTTGAAGAAAAAAATACCAAAATCTTATCAGACTTTCCAGAAGTAGTACTTATTTCAAAAGATA
CAAATATGCGAATCAAGGCTGATGCAGTTGGTCTCAAAGCGGAAGATTATTATAAAGACAAGATTTCTTTAGAAAATTTA
GAAAAAGGTTTTAGGGAAATAAGTTCCAATTCAGATGAGATAAATAAGGTTCAAAAAGATGGGTTTATTTATTTAAGAGA
TATTAAATCAAAATTTGAACCATCTTTAGTAAGTAATGAGGGTGTAATCTTAAAAGATAATTTAAAAGAAAATCATACTT
TTTTAACTAGATATAATCAATCTGAGAAAAAGTTAGTAGGTCTTAATCACTTAAGAAGATCAAATTTAGGTAAAGTCAAA
CCTAAGAATCTTGAACAAAATTTTGCTTTAGATTTGCTACTTGATCCAAAAGTTCAATTAGTAAGTCTTGTCGGAAAAGC
AGGAACAGGAAAAACTTTACTTGCTTTGGCCGTTGGACTACATCAAGTTGCAGATGAAAACATTTACGAAAGATTATTAG
TATCTAGACCACCAATACCTTTAGGAAAAGAATTAGGTTATCTGCCAGGTAGTCTTGATGAGAAATTAGCTCCTTGGATG
AAACCAATTATTGATAATTTAGATTATCTAACAAGTCCAAAAACGAACAAAAATGGAGAAAAAAATGATCGTAAAGAAAG
AGATAATCACTCTAAAAACTCATGGGAAGATTTGAGAGGTATGGGTCTACTGGAAGTAGAAGCAATAAATTACATTAGAG
GAAGATCAATTACTAATCAATTCATTCTTATTGATGAAGCACAAAATTTAACACCTTTAGAAGTTAAAACTATTGTTACC
AGAGCAGGAGAAGGAACTAAGATTGTTTTTACGGGCGATCCAAATCAAATAGATCATCCTTATCTTGATTCTGATAGTAA
TGGTTTGACTTGGTTAGCAAAAAAATTGCATGGACAAAAAATAATTGGACACATCACTTTATCTCAAGGAGAAAGAAGTG
ATTTAGCAGAATTAGCAGCGGATCTTTTATAG
ATGAAAAAAAGAGTTATTGTTCTTGACACAAATGTCTTATTACATGATCCAGAATCACCTCTTCATTTTGCTAATGAAAA
TGTTGTAATCCCAATTCAAGTAGTTGAAGAGGTTGATAGATTCAAACGCGATCCTGGAGAGAAAGGTCGCAATGCCAGAA
GATTTTCTAGACTACTAGATAGTCTTCGAGAAAAAGGTAATCTATCTTCAGGTGCAAAAATTAATAATAAATTTGAAGGG
ACAATAAAAGTTGCATTTTGCAGAAAAGAGACAACTGATAGATTGCCCTTAGAACTAAATGATAGTAGTGGAGATAATAA
AATTTTAGCTGTCGCTCTTGAAGAAAAAAATACCAAAATCTTATCAGACTTTCCAGAAGTAGTACTTATTTCAAAAGATA
CAAATATGCGAATCAAGGCTGATGCAGTTGGTCTCAAAGCGGAAGATTATTATAAAGACAAGATTTCTTTAGAAAATTTA
GAAAAAGGTTTTAGGGAAATAAGTTCCAATTCAGATGAGATAAATAAGGTTCAAAAAGATGGGTTTATTTATTTAAGAGA
TATTAAATCAAAATTTGAACCATCTTTAGTAAGTAATGAGGGTGTAATCTTAAAAGATAATTTAAAAGAAAATCATACTT
TTTTAACTAGATATAATCAATCTGAGAAAAAGTTAGTAGGTCTTAATCACTTAAGAAGATCAAATTTAGGTAAAGTCAAA
CCTAAGAATCTTGAACAAAATTTTGCTTTAGATTTGCTACTTGATCCAAAAGTTCAATTAGTAAGTCTTGTCGGAAAAGC
AGGAACAGGAAAAACTTTACTTGCTTTGGCCGTTGGACTACATCAAGTTGCAGATGAAAACATTTACGAAAGATTATTAG
TATCTAGACCACCAATACCTTTAGGAAAAGAATTAGGTTATCTGCCAGGTAGTCTTGATGAGAAATTAGCTCCTTGGATG
AAACCAATTATTGATAATTTAGATTATCTAACAAGTCCAAAAACGAACAAAAATGGAGAAAAAAATGATCGTAAAGAAAG
AGATAATCACTCTAAAAACTCATGGGAAGATTTGAGAGGTATGGGTCTACTGGAAGTAGAAGCAATAAATTACATTAGAG
GAAGATCAATTACTAATCAATTCATTCTTATTGATGAAGCACAAAATTTAACACCTTTAGAAGTTAAAACTATTGTTACC
AGAGCAGGAGAAGGAACTAAGATTGTTTTTACGGGCGATCCAAATCAAATAGATCATCCTTATCTTGATTCTGATAGTAA
TGGTTTGACTTGGTTAGCAAAAAAATTGCATGGACAAAAAATAATTGGACACATCACTTTATCTCAAGGAGAAAGAAGTG
ATTTAGCAGAATTAGCAGCGGATCTTTTATAG
Antitoxin
Download Length: 295 a.a. Molecular weight: 33039.16 Da Isoelectric Point: 9.4531
>AT22490 WP_012008285.1 NC_009840:1410253-1411137 [Prochlorococcus marinus str. MIT 9215]
MKDKFKCNFAKERSNEVELVASNLEAILKSSTYKLAHEDIDLLNTDEMRGVRMLLEITKPEQVLEKEKIISTVIVFGGVH
ISEEIASKRRVDDAVKLLSKNPNSKSLKITIEKLKNLHSLSHYYSSARELSKLISLDSKTKSSNSHVIVTGGGPGIMEAA
NRGAFDAGCKSIGLNISLPNEQHPNSFITPGLCFKFNYFAMRKFHFVMRSTSAVFFPGGFGTLDELFELLTLRQTNMKGK
IPIILFGRSYWEKVINFQFLSDMGLIGENDLSIFQYADTANEAWNLIKQSSKKL
MKDKFKCNFAKERSNEVELVASNLEAILKSSTYKLAHEDIDLLNTDEMRGVRMLLEITKPEQVLEKEKIISTVIVFGGVH
ISEEIASKRRVDDAVKLLSKNPNSKSLKITIEKLKNLHSLSHYYSSARELSKLISLDSKTKSSNSHVIVTGGGPGIMEAA
NRGAFDAGCKSIGLNISLPNEQHPNSFITPGLCFKFNYFAMRKFHFVMRSTSAVFFPGGFGTLDELFELLTLRQTNMKGK
IPIILFGRSYWEKVINFQFLSDMGLIGENDLSIFQYADTANEAWNLIKQSSKKL
Download Length: 885 bp
>AT22490 NC_009840:1410253-1411137 [Prochlorococcus marinus str. MIT 9215]
ATGAAAGACAAATTTAAATGTAATTTTGCAAAAGAAAGAAGTAACGAGGTTGAATTAGTTGCTAGTAATTTAGAAGCAAT
TTTAAAATCTAGTACTTATAAACTTGCTCACGAAGATATAGATTTATTGAATACTGATGAAATGAGAGGGGTGAGGATGC
TCCTTGAAATAACAAAGCCTGAGCAGGTACTCGAGAAAGAAAAGATAATTTCAACTGTAATTGTTTTTGGAGGTGTCCAC
ATATCCGAAGAGATTGCATCCAAAAGAAGGGTCGATGATGCGGTCAAACTTCTTTCAAAAAATCCCAACTCTAAATCTTT
AAAGATCACTATCGAGAAATTAAAAAATTTGCACTCCCTCTCACATTATTATTCTTCAGCGAGAGAGTTATCTAAATTAA
TCTCGCTAGATAGCAAAACAAAAAGTTCCAATTCGCATGTAATAGTTACTGGTGGAGGACCAGGGATTATGGAAGCAGCT
AACAGAGGAGCATTTGATGCTGGCTGCAAGTCTATTGGATTAAACATAAGCCTACCAAATGAGCAACACCCTAATTCTTT
TATCACACCAGGATTATGTTTTAAATTTAATTATTTTGCCATGAGGAAATTTCATTTCGTTATGAGATCTACTTCTGCAG
TTTTTTTTCCAGGAGGATTTGGAACTTTAGATGAATTATTTGAATTATTAACATTAAGACAGACCAACATGAAGGGGAAA
ATTCCAATAATCTTATTTGGCAGAAGCTATTGGGAAAAGGTAATAAATTTTCAATTTTTATCTGATATGGGGTTAATTGG
AGAGAATGATTTGTCTATTTTTCAATACGCTGATACAGCAAATGAAGCTTGGAATTTAATAAAACAAAGTAGCAAAAAGC
TTTAG
ATGAAAGACAAATTTAAATGTAATTTTGCAAAAGAAAGAAGTAACGAGGTTGAATTAGTTGCTAGTAATTTAGAAGCAAT
TTTAAAATCTAGTACTTATAAACTTGCTCACGAAGATATAGATTTATTGAATACTGATGAAATGAGAGGGGTGAGGATGC
TCCTTGAAATAACAAAGCCTGAGCAGGTACTCGAGAAAGAAAAGATAATTTCAACTGTAATTGTTTTTGGAGGTGTCCAC
ATATCCGAAGAGATTGCATCCAAAAGAAGGGTCGATGATGCGGTCAAACTTCTTTCAAAAAATCCCAACTCTAAATCTTT
AAAGATCACTATCGAGAAATTAAAAAATTTGCACTCCCTCTCACATTATTATTCTTCAGCGAGAGAGTTATCTAAATTAA
TCTCGCTAGATAGCAAAACAAAAAGTTCCAATTCGCATGTAATAGTTACTGGTGGAGGACCAGGGATTATGGAAGCAGCT
AACAGAGGAGCATTTGATGCTGGCTGCAAGTCTATTGGATTAAACATAAGCCTACCAAATGAGCAACACCCTAATTCTTT
TATCACACCAGGATTATGTTTTAAATTTAATTATTTTGCCATGAGGAAATTTCATTTCGTTATGAGATCTACTTCTGCAG
TTTTTTTTCCAGGAGGATTTGGAACTTTAGATGAATTATTTGAATTATTAACATTAAGACAGACCAACATGAAGGGGAAA
ATTCCAATAATCTTATTTGGCAGAAGCTATTGGGAAAAGGTAATAAATTTTCAATTTTTATCTGATATGGGGTTAATTGG
AGAGAATGATTTGTCTATTTTTCAATACGCTGATACAGCAAATGAAGCTTGGAATTTAATAAAACAAAGTAGCAAAAAGC
TTTAG
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|