Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | omega-epsilon-zeta/zeta-epsilon |
| Location | 1432762..1433899 | Replicon | chromosome |
| Accession | NZ_CP086564 | ||
| Organism | Enterococcus faecalis strain E512-TC1 | ||
Toxin (Protein)
| Gene name | zeta | Uniprot ID | - |
| Locus tag | LM511_RS06890 | Protein ID | WP_002401483.1 |
| Coordinates | 1432762..1433625 (-) | Length | 288 a.a. |
Antitoxin (Protein)
| Gene name | epsilon | Uniprot ID | R2XCR7 |
| Locus tag | LM511_RS06895 | Protein ID | WP_000301765.1 |
| Coordinates | 1433627..1433899 (-) | Length | 91 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LM511_RS06860 (1428560) | 1428560..1429327 | - | 768 | WP_002357481.1 | ribonuclease HII | - |
| LM511_RS06865 (1429329) | 1429329..1430180 | - | 852 | WP_002357480.1 | ribosome biogenesis GTPase YlqF | - |
| LM511_RS06870 (1430456) | 1430456..1430887 | - | 432 | Protein_1324 | 2-dehydropantoate 2-reductase | - |
| LM511_RS06875 (1430943) | 1430943..1431623 | - | 681 | WP_010710189.1 | IS6-like element IS1216 family transposase | - |
| LM511_RS06880 (1431697) | 1431697..1431984 | - | 288 | Protein_1326 | DnaJ domain-containing protein | - |
| LM511_RS06885 (1432004) | 1432004..1432321 | - | 318 | WP_002333463.1 | hypothetical protein | - |
| LM511_RS06890 (1432762) | 1432762..1433625 | - | 864 | WP_002401483.1 | zeta toxin family protein | Toxin |
| LM511_RS06895 (1433627) | 1433627..1433899 | - | 273 | WP_000301765.1 | antitoxin | Antitoxin |
| LM511_RS06900 (1433916) | 1433916..1434131 | - | 216 | WP_002295735.1 | peptide-binding protein | - |
| LM511_RS06905 (1434230) | 1434230..1435126 | - | 897 | WP_002387620.1 | ParA family protein | - |
| LM511_RS06910 (1435229) | 1435229..1435489 | - | 261 | Protein_1332 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| LM511_RS06915 (1435659) | 1435659..1436396 | - | 738 | WP_002292226.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | - |
| LM511_RS06920 (1436521) | 1436521..1436616 | - | 96 | WP_001809736.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| LM511_RS06925 (1436685) | 1436685..1436807 | - | 123 | Protein_1335 | peptide-binding protein | - |
| LM511_RS06930 (1436927) | 1436927..1438453 | - | 1527 | WP_025191980.1 | type IA DNA topoisomerase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | IScluster/Tn | erm(B) / ant(6)-Ia / lnu(B) / lsa(E) / aph(3')-III / aac(6')-aph(2'') | - | 1430943..1461549 | 30606 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 288 a.a. Molecular weight: 32486.06 Da Isoelectric Point: 6.9965
>T223869 WP_002401483.1 NZ_CP086564:c1433625-1432762 [Enterococcus faecalis]
MANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAILEETQGNVIVIDNDTFKQQHPNFDELA
KLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYE
TMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSRLETPSISPKETLERELNRKVSGKEIQ
PTLERIEQKMLQNQHQETPEFKAIQQKMESLQPPTPPIPKTPKLPGL
MANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLRSAILEETQGNVIVIDNDTFKQQHPNFDELA
KLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYE
TMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSRLETPSISPKETLERELNRKVSGKEIQ
PTLERIEQKMLQNQHQETPEFKAIQQKMESLQPPTPPIPKTPKLPGL
Download Length: 864 bp
>T223869 NZ_CP119370:2426405-2426656 [Pseudomonas sp. CBSPCBW29]
GTGTCGAAAAATGAAAAGCTGCTGGCCAAACTGCTCAATGAACAATCGGCTTTTACCTGGGCCGAACGGGTAACGCTGCT
GCGGCGACTGGGCTACACGCAAATCGAAGGCGCGGGTAGCCGAGTCAGGTTCGACATAGGCGACCCCAGTGCAATGATCA
CCTTGCACAAGCCTCACCCCGGCAACGAACTGAAACACTACATTCGGCGCCAAATCATCGAACAATTGAAATCAGGAGAA
CTGATTCAGTGA
GTGTCGAAAAATGAAAAGCTGCTGGCCAAACTGCTCAATGAACAATCGGCTTTTACCTGGGCCGAACGGGTAACGCTGCT
GCGGCGACTGGGCTACACGCAAATCGAAGGCGCGGGTAGCCGAGTCAGGTTCGACATAGGCGACCCCAGTGCAATGATCA
CCTTGCACAAGCCTCACCCCGGCAACGAACTGAAACACTACATTCGGCGCCAAATCATCGAACAATTGAAATCAGGAGAA
CTGATTCAGTGA
Antitoxin
Download Length: 91 a.a. Molecular weight: 10721.25 Da Isoelectric Point: 6.4676
>AT223869 WP_000301765.1 NZ_CP086564:c1433899-1433627 [Enterococcus faecalis]
MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYS
KQVLNKEKVA
MAVTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLLEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYS
KQVLNKEKVA
Download Length: 273 bp
>AT223869 NZ_CP119370:2426653-2427009 [Pseudomonas sp. CBSPCBW29]
GTGAACAACCAGCTGAAACACAAAGGCTACATCGGCTCCATCGAAGCCAGCCTCGAAGACAACTGCCTCTTCGGAAAGCT
GCTTTTCATCAAGGCCCTGGTCAGCTACGAGGGGAAAACCGTCGCCGAACTGGATACGGCCTTTTGCACCGCCGTGGACG
ACTACATCGAGACCTGCATGGCCCTTGGGCAAACACCGGAAAAGCCCTGCAAGGGCTCGTTCAACGTCCGTGTCGGCCAT
GACCTCCATTTGGCCGCCGCCCTCGCGGCGACCCGGCAAAAAGTCACGCTGAACGACCTCACACGGCAAGCGCTGAACGA
ATTCCTGCAACATCGCGGCGCACTCGTTGCCGGGTAA
GTGAACAACCAGCTGAAACACAAAGGCTACATCGGCTCCATCGAAGCCAGCCTCGAAGACAACTGCCTCTTCGGAAAGCT
GCTTTTCATCAAGGCCCTGGTCAGCTACGAGGGGAAAACCGTCGCCGAACTGGATACGGCCTTTTGCACCGCCGTGGACG
ACTACATCGAGACCTGCATGGCCCTTGGGCAAACACCGGAAAAGCCCTGCAAGGGCTCGTTCAACGTCCGTGTCGGCCAT
GACCTCCATTTGGCCGCCGCCCTCGCGGCGACCCGGCAAAAAGTCACGCTGAACGACCTCACACGGCAAGCGCTGAACGA
ATTCCTGCAACATCGCGGCGCACTCGTTGCCGGGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|