Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mosAT/AbiEii-AbiEi |
Location | 2244462..2246178 | Replicon | chromosome |
Accession | NC_009665 | ||
Organism | Shewanella baltica OS185 |
Toxin (Protein)
Gene name | mosT | Uniprot ID | - |
Locus tag | SHEW185_RS09690 | Protein ID | WP_012088992.1 |
Coordinates | 2245243..2246178 (+) | Length | 312 a.a. |
Antitoxin (Protein)
Gene name | mosA | Uniprot ID | - |
Locus tag | SHEW185_RS09685 | Protein ID | WP_012088990.1 |
Coordinates | 2244462..2245250 (+) | Length | 263 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
SHEW185_RS09670 | 2239642..2241852 | + | 2211 | WP_012088986.1 | amidohydrolase family protein | - |
SHEW185_RS09680 | 2242672..2243412 | - | 741 | WP_012088988.1 | transporter substrate-binding domain-containing protein | - |
SHEW185_RS09685 | 2244462..2245250 | + | 789 | WP_012088990.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin |
SHEW185_RS09690 | 2245243..2246178 | + | 936 | WP_012088992.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin |
SHEW185_RS09695 | 2246629..2247072 | + | 444 | WP_012088994.1 | low molecular weight phosphotyrosine protein phosphatase | - |
SHEW185_RS09700 | 2247278..2248219 | - | 942 | WP_006081350.1 | ribosome biogenesis GTPase YlqF | - |
SHEW185_RS09705 | 2248370..2249209 | - | 840 | WP_012088996.1 | isopenicillin N synthase family oxygenase | - |
SHEW185_RS09710 | 2249588..2250493 | + | 906 | WP_012088997.1 | bifunctional methionine sulfoxide reductase B/A protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 312 a.a. Molecular weight: 35359.17 Da Isoelectric Point: 6.7660
>T22317 WP_012088992.1 NC_009665:2245243-2246178 [Shewanella baltica OS185]
MNKSSIYYQQVTLLIRMLPLVAQEKVFALKGGTAINLFVRNFPRLSVDIDLAYLPLEPREQALQSVKEALGRLTAQINLQ
PNLSAVFQDNKYDELRVVVTSDRVTIKIEVSPVARGTLHKAVLMPVVELVEEEFGYAEIPVVSLPDLYGGKLCAAMDRQH
PRDLFDVKMLLAEEGITREILVGFLTYTLSHPRPINEVMSPRWKPLDESFQTEFNGMTTKPIKLDELILTRSEMLTALQH
HFTAKDRDFLLSFKQGQPDWSLFDEPSVAALPAVRWKLLNIQNLAKNKSKHQEQLIKLADVLETWVAGRIL
MNKSSIYYQQVTLLIRMLPLVAQEKVFALKGGTAINLFVRNFPRLSVDIDLAYLPLEPREQALQSVKEALGRLTAQINLQ
PNLSAVFQDNKYDELRVVVTSDRVTIKIEVSPVARGTLHKAVLMPVVELVEEEFGYAEIPVVSLPDLYGGKLCAAMDRQH
PRDLFDVKMLLAEEGITREILVGFLTYTLSHPRPINEVMSPRWKPLDESFQTEFNGMTTKPIKLDELILTRSEMLTALQH
HFTAKDRDFLLSFKQGQPDWSLFDEPSVAALPAVRWKLLNIQNLAKNKSKHQEQLIKLADVLETWVAGRIL
Download Length: 936 bp
>T22317 NC_009665:2245243-2246178 [Shewanella baltica OS185]
ATGAATAAGTCATCGATATACTACCAGCAAGTGACCTTGCTTATTCGGATGCTGCCGCTCGTCGCCCAAGAGAAGGTATT
TGCTCTAAAGGGCGGTACGGCTATCAACCTATTTGTGCGCAACTTCCCACGATTATCGGTCGATATCGATTTGGCTTATC
TTCCTTTGGAGCCAAGGGAACAAGCGCTACAAAGTGTGAAGGAAGCGCTTGGTCGTTTGACTGCGCAGATCAATCTACAA
CCGAACCTTAGTGCAGTATTTCAAGACAATAAATATGATGAGCTCAGGGTCGTCGTGACAAGTGATAGAGTGACAATAAA
AATTGAAGTCTCTCCTGTTGCGAGAGGTACGCTACACAAAGCGGTATTAATGCCAGTCGTTGAGTTAGTTGAAGAAGAAT
TTGGGTACGCAGAGATCCCCGTCGTAAGCCTGCCTGATCTATACGGTGGTAAGTTATGTGCAGCGATGGATAGACAGCAC
CCAAGGGATCTATTTGATGTGAAAATGCTGCTGGCGGAAGAGGGGATCACTCGAGAGATTTTAGTCGGCTTTCTCACTTA
TACACTTAGCCATCCAAGGCCTATTAATGAAGTGATGTCTCCACGCTGGAAACCGCTTGATGAAAGCTTTCAAACTGAAT
TCAATGGAATGACGACAAAGCCGATTAAACTCGATGAGCTTATTTTAACTCGCTCAGAAATGCTGACAGCGTTGCAGCAT
CACTTTACTGCAAAAGACAGAGACTTTTTATTATCCTTTAAACAGGGTCAGCCTGATTGGTCATTGTTTGATGAACCGAG
CGTCGCGGCACTACCTGCGGTGAGATGGAAGCTATTGAATATCCAAAACCTAGCGAAAAACAAATCCAAGCATCAAGAAC
AACTCATTAAACTGGCTGATGTATTGGAAACGTGGGTTGCAGGTCGGATACTGTAA
ATGAATAAGTCATCGATATACTACCAGCAAGTGACCTTGCTTATTCGGATGCTGCCGCTCGTCGCCCAAGAGAAGGTATT
TGCTCTAAAGGGCGGTACGGCTATCAACCTATTTGTGCGCAACTTCCCACGATTATCGGTCGATATCGATTTGGCTTATC
TTCCTTTGGAGCCAAGGGAACAAGCGCTACAAAGTGTGAAGGAAGCGCTTGGTCGTTTGACTGCGCAGATCAATCTACAA
CCGAACCTTAGTGCAGTATTTCAAGACAATAAATATGATGAGCTCAGGGTCGTCGTGACAAGTGATAGAGTGACAATAAA
AATTGAAGTCTCTCCTGTTGCGAGAGGTACGCTACACAAAGCGGTATTAATGCCAGTCGTTGAGTTAGTTGAAGAAGAAT
TTGGGTACGCAGAGATCCCCGTCGTAAGCCTGCCTGATCTATACGGTGGTAAGTTATGTGCAGCGATGGATAGACAGCAC
CCAAGGGATCTATTTGATGTGAAAATGCTGCTGGCGGAAGAGGGGATCACTCGAGAGATTTTAGTCGGCTTTCTCACTTA
TACACTTAGCCATCCAAGGCCTATTAATGAAGTGATGTCTCCACGCTGGAAACCGCTTGATGAAAGCTTTCAAACTGAAT
TCAATGGAATGACGACAAAGCCGATTAAACTCGATGAGCTTATTTTAACTCGCTCAGAAATGCTGACAGCGTTGCAGCAT
CACTTTACTGCAAAAGACAGAGACTTTTTATTATCCTTTAAACAGGGTCAGCCTGATTGGTCATTGTTTGATGAACCGAG
CGTCGCGGCACTACCTGCGGTGAGATGGAAGCTATTGAATATCCAAAACCTAGCGAAAAACAAATCCAAGCATCAAGAAC
AACTCATTAAACTGGCTGATGTATTGGAAACGTGGGTTGCAGGTCGGATACTGTAA
Antitoxin
Download Length: 263 a.a. Molecular weight: 29981.14 Da Isoelectric Point: 9.5422
>AT22317 WP_012088990.1 NC_009665:2244462-2245250 [Shewanella baltica OS185]
MSSKINWLINHTSPGAVVLQSWLTQNEISSSLVRKYVQSGWLYKISAGVYVRPESTGKLQPHWVEALKAVNEQLKLPVHL
AGVSSLTHQGLSHYLQLSSEQVWVGCQSKLALPKWFRELEEQNWLFYTSSKLTQTLEKDFITIGVNNREVKASCAELAAY
EVVNAIGKHISFEHAAELFQGLVNLSPRRIQSILNRSEAVQANRVFLFLGHYYQHQWSKRLDEQQITLGAGKRQVVAHGR
YDRRYQITVPASFIKTEENQYE
MSSKINWLINHTSPGAVVLQSWLTQNEISSSLVRKYVQSGWLYKISAGVYVRPESTGKLQPHWVEALKAVNEQLKLPVHL
AGVSSLTHQGLSHYLQLSSEQVWVGCQSKLALPKWFRELEEQNWLFYTSSKLTQTLEKDFITIGVNNREVKASCAELAAY
EVVNAIGKHISFEHAAELFQGLVNLSPRRIQSILNRSEAVQANRVFLFLGHYYQHQWSKRLDEQQITLGAGKRQVVAHGR
YDRRYQITVPASFIKTEENQYE
Download Length: 789 bp
>AT22317 NC_009665:2244462-2245250 [Shewanella baltica OS185]
ATGTCATCAAAAATAAACTGGCTGATTAATCATACGAGTCCTGGTGCGGTAGTGCTTCAGTCGTGGTTGACACAAAATGA
GATCAGCTCATCTTTGGTGAGAAAATATGTGCAGAGTGGTTGGTTGTACAAGATAAGTGCGGGGGTTTACGTTCGTCCTG
AGTCAACAGGTAAGTTACAGCCTCATTGGGTTGAAGCGCTCAAGGCTGTGAATGAGCAGCTAAAGCTTCCTGTTCACCTT
GCGGGAGTCAGTAGCCTAACACATCAAGGGCTTAGTCATTATCTTCAACTAAGCAGCGAGCAAGTTTGGGTTGGCTGTCA
AAGTAAGCTGGCGTTGCCAAAGTGGTTCCGCGAATTGGAGGAGCAAAACTGGCTTTTTTACACCAGTAGCAAGCTGACCC
AAACGTTAGAAAAAGACTTTATTACTATAGGGGTAAACAATAGGGAAGTTAAGGCAAGTTGTGCGGAGCTTGCAGCCTAT
GAGGTCGTCAATGCCATTGGTAAACATATCAGTTTTGAGCATGCCGCGGAGCTGTTTCAAGGGTTAGTGAATCTCAGCCC
ACGTAGAATACAGTCAATACTGAATAGAAGTGAAGCCGTACAAGCTAATCGCGTATTTCTCTTTTTAGGCCACTACTATC
AACACCAGTGGAGCAAAAGGCTAGATGAGCAGCAAATCACGCTCGGTGCGGGAAAGCGTCAGGTGGTGGCTCATGGCCGT
TACGATAGGCGGTATCAAATAACAGTGCCGGCATCGTTTATTAAGACAGAAGAAAATCAATATGAATAA
ATGTCATCAAAAATAAACTGGCTGATTAATCATACGAGTCCTGGTGCGGTAGTGCTTCAGTCGTGGTTGACACAAAATGA
GATCAGCTCATCTTTGGTGAGAAAATATGTGCAGAGTGGTTGGTTGTACAAGATAAGTGCGGGGGTTTACGTTCGTCCTG
AGTCAACAGGTAAGTTACAGCCTCATTGGGTTGAAGCGCTCAAGGCTGTGAATGAGCAGCTAAAGCTTCCTGTTCACCTT
GCGGGAGTCAGTAGCCTAACACATCAAGGGCTTAGTCATTATCTTCAACTAAGCAGCGAGCAAGTTTGGGTTGGCTGTCA
AAGTAAGCTGGCGTTGCCAAAGTGGTTCCGCGAATTGGAGGAGCAAAACTGGCTTTTTTACACCAGTAGCAAGCTGACCC
AAACGTTAGAAAAAGACTTTATTACTATAGGGGTAAACAATAGGGAAGTTAAGGCAAGTTGTGCGGAGCTTGCAGCCTAT
GAGGTCGTCAATGCCATTGGTAAACATATCAGTTTTGAGCATGCCGCGGAGCTGTTTCAAGGGTTAGTGAATCTCAGCCC
ACGTAGAATACAGTCAATACTGAATAGAAGTGAAGCCGTACAAGCTAATCGCGTATTTCTCTTTTTAGGCCACTACTATC
AACACCAGTGGAGCAAAAGGCTAGATGAGCAGCAAATCACGCTCGGTGCGGGAAAGCGTCAGGTGGTGGCTCATGGCCGT
TACGATAGGCGGTATCAAATAACAGTGCCGGCATCGTTTATTAAGACAGAAGAAAATCAATATGAATAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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