Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) unclassified/Polyketide_cyc2(toxin)
Location 1015989..1016608 Replicon chromosome
Accession NC_009525
Organism Mycobacterium tuberculosis H37Ra

Toxin (Protein)


Gene name novel[antitoxin] Uniprot ID -
Locus tag MRA_RS04815 Protein ID WP_003404726.1
Coordinates 1016174..1016608 (+) Length 145 a.a.

Antitoxin (Protein)


Gene name novel[toxin] Uniprot ID P9WJ06
Locus tag MRA_RS04810 Protein ID WP_003898641.1
Coordinates 1015989..1016168 (+) Length 60 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MRA_RS04800 1011462..1013042 + 1581 WP_003909313.1 serine hydrolase -
MRA_RS04805 1013039..1015432 + 2394 WP_003898639.1 cation-translocating P-type ATPase -
MRA_RS22575 1015705..1015863 + 159 WP_003404720.1 hypothetical protein -
MRA_RS04810 1015989..1016168 + 180 WP_003898641.1 antitoxin Antitoxin
MRA_RS04815 1016174..1016608 + 435 WP_003404726.1 SRPBCC family protein Toxin
MRA_RS04820 1016706..1017479 + 774 WP_003404735.1 VOC family protein -
MRA_RS04825 1017544..1017993 + 450 WP_003404738.1 hypothetical protein -
MRA_RS04830 1018128..1018358 - 231 WP_003898642.1 hypothetical protein -
MRA_RS04835 1018525..1020033 - 1509 WP_003404742.1 carotenoid oxygenase family protein -
MRA_RS04840 1020035..1021273 - 1239 WP_003404744.1 acetyl-CoA acetyltransferase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(1-142)

Antitoxin

(4-50)


Sequences


Toxin        


Download         Length: 145 a.a.        Molecular weight: 15754.47 Da        Isoelectric Point: 9.7977

>T22150 WP_003404726.1 NC_009525:1016174-1016608 [Mycobacterium tuberculosis H37Ra]
MAKLSGSIDVPLPPEEAWMHASDLTRYREWLTIHKVWRSKLPEVLEKGTVVESYVEVKGMPNRIKWTIVRYKPPEGMTLN
GDGVGGVKVKLIAKVAPKEHGSVVSFDVHLGGPALLGPIGMIVAAALRADIRESLQNFVTVFAG

Download         Length: 435 bp

>T22150 NC_009525:1016174-1016608 [Mycobacterium tuberculosis H37Ra]
ATGGCGAAACTGTCCGGATCCATCGACGTACCGCTGCCACCGGAGGAAGCCTGGATGCACGCCTCCGATCTGACTCGTTA
CCGAGAGTGGCTGACCATCCACAAGGTATGGCGCAGCAAGTTGCCCGAAGTGCTCGAGAAGGGCACGGTCGTCGAGTCGT
ATGTCGAGGTCAAGGGCATGCCCAACCGGATCAAGTGGACGATCGTGCGGTACAAACCCCCGGAGGGCATGACGCTCAAC
GGCGACGGTGTGGGTGGTGTCAAAGTCAAGCTGATCGCTAAGGTAGCGCCGAAAGAGCACGGCTCCGTCGTCAGCTTCGA
TGTGCACCTCGGCGGCCCGGCCCTGCTCGGGCCGATCGGCATGATCGTCGCCGCTGCATTGCGAGCCGACATCCGCGAAT
CGCTGCAGAACTTCGTCACGGTGTTTGCCGGCTGA

Antitoxin


Download         Length: 60 a.a.        Molecular weight: 6403.07 Da        Isoelectric Point: 4.5393

>AT22150 WP_003898641.1 NC_009525:1015989-1016168 [Mycobacterium tuberculosis H37Ra]
MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQS

Download         Length: 180 bp

>AT22150 NC_009525:1015989-1016168 [Mycobacterium tuberculosis H37Ra]
ATGGGAATCCTGGACAAGGTAAAGAACCTGCTGTCGCAGAACGCCGACAAGGTCGAGACGGTGATCAACAAAGCGGGCGA
ATTCGTCGACGAGCAGACGCAAGGCAATTATTCTGACGCCATCCACAAGCTGCATGACGCGGCCAGCAACGTCGTCGGCA
TGAGCGACCAGCAGAGCTAG

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure
AlphaFold DB A0A045KDK5

References