Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | tacAT/DUF1778(antitoxin) |
| Location | 354803..355584 | Replicon | chromosome |
| Accession | NZ_CP085793 | ||
| Organism | Salmonella enterica subsp. enterica serovar Enteritidis strain Poochyena | ||
Toxin (Protein)
| Gene name | TacT2 | Uniprot ID | B5R980 |
| Locus tag | LJF61_RS01575 | Protein ID | WP_000626100.1 |
| Coordinates | 355093..355584 (+) | Length | 164 a.a. |
Antitoxin (Protein)
| Gene name | TacA2 | Uniprot ID | B5R979 |
| Locus tag | LJF61_RS01570 | Protein ID | WP_001110452.1 |
| Coordinates | 354803..355096 (+) | Length | 98 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJF61_RS01535 (350850) | 350850..351755 | + | 906 | WP_001268200.1 | YjiK family protein | - |
| LJF61_RS01540 (352049) | 352049..352180 | - | 132 | Protein_289 | hypothetical protein | - |
| LJF61_RS01545 (352292) | 352292..352540 | - | 249 | Protein_290 | Ig-like domain-containing protein | - |
| LJF61_RS01550 (352539) | 352539..352847 | + | 309 | WP_072095651.1 | ABC transporter ATP-binding protein | - |
| LJF61_RS01555 (352840) | 352840..353127 | - | 288 | WP_001541332.1 | transcriptional regulator RtsB | - |
| LJF61_RS01560 (353124) | 353124..353999 | - | 876 | WP_000921676.1 | AraC family transcriptional regulator | - |
| LJF61_RS01565 (354265) | 354265..354486 | - | 222 | WP_001576552.1 | hypothetical protein | - |
| LJF61_RS01570 (354803) | 354803..355096 | + | 294 | WP_001110452.1 | DUF1778 domain-containing protein | Antitoxin |
| LJF61_RS01575 (355093) | 355093..355584 | + | 492 | WP_000626100.1 | GNAT family N-acetyltransferase | Toxin |
| LJF61_RS01580 (355832) | 355832..356584 | - | 753 | WP_000842433.1 | non-specific acid phosphatase | - |
| LJF61_RS01585 (356684) | 356684..356761 | - | 78 | Protein_298 | porin family protein | - |
| LJF61_RS01590 (357141) | 357141..357215 | + | 75 | Protein_299 | helix-turn-helix domain-containing protein | - |
| LJF61_RS01600 (357486) | 357486..358061 | - | 576 | WP_001188509.1 | transcriptional regulator | - |
| LJF61_RS01605 (358098) | 358098..359801 | - | 1704 | WP_000068885.1 | protein-disulfide reductase DsbD | - |
| LJF61_RS01610 (359777) | 359777..360124 | - | 348 | WP_000887832.1 | divalent cation tolerance protein CutA | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 164 a.a. Molecular weight: 17645.45 Da Isoelectric Point: 7.7297
>T221332 WP_000626100.1 NZ_CP085793:355093-355584 [Salmonella enterica subsp. enterica serovar Enteritidis]
MISTPEPLHAGHILTPFCCGVDSIDNWLKQRAMKNQTTGASRTFVCCGSDSNVLAYYSLASSAVTTNTSPGRFRRNMPDP
IPVVVLGRLAVDKSLHGQGVARALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYQRVGFVPSPMDPMMLMVTLGDLV
ESV
MISTPEPLHAGHILTPFCCGVDSIDNWLKQRAMKNQTTGASRTFVCCGSDSNVLAYYSLASSAVTTNTSPGRFRRNMPDP
IPVVVLGRLAVDKSLHGQGVARALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYQRVGFVPSPMDPMMLMVTLGDLV
ESV
Download Length: 492 bp
>T221332 NZ_CP117378:3486520-3486738 [Salmonella enterica subsp. enterica serovar Newport]
ATGTCTGATAAACCATTAACTAAAACTGATTATTTGATGCGTTTACGGCGCTGTCAGACAATTGACACTCTGGAGCGCGT
CATTGAGAAAAATAAATATGAATTGTCCGACAATGAGCTGGCTGTATTTTACTCAGCTGCGGATCACCGTCTTGCAGAAT
TGACGATGAACAAACTCTACGACAAGATCCCCTCTTCAGTATGGAAATTCATTCGTTAA
ATGTCTGATAAACCATTAACTAAAACTGATTATTTGATGCGTTTACGGCGCTGTCAGACAATTGACACTCTGGAGCGCGT
CATTGAGAAAAATAAATATGAATTGTCCGACAATGAGCTGGCTGTATTTTACTCAGCTGCGGATCACCGTCTTGCAGAAT
TGACGATGAACAAACTCTACGACAAGATCCCCTCTTCAGTATGGAAATTCATTCGTTAA
Antitoxin
Download Length: 98 a.a. Molecular weight: 10977.61 Da Isoelectric Point: 8.6141
>AT221332 WP_001110452.1 NZ_CP085793:354803-355096 [Salmonella enterica subsp. enterica serovar Enteritidis]
MPAANSMAMKRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPEAYQEFLVRLDQTPSPN
AALRKTMQTPAPWEQEK
MPAANSMAMKRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPEAYQEFLVRLDQTPSPN
AALRKTMQTPAPWEQEK
Download Length: 294 bp
>AT221332 NZ_CP117378:3486118-3486492 [Salmonella enterica subsp. enterica serovar Newport]
ATGGACGAATACTCACCCAAAAGACATGATATAGCACAGCTTAAATTTCTTTGCGAAACCCTGTATCATGACTGTCTTGC
AAACCTTGAAGAAAGCAACCATGGCTGGGTTAATGACCCGACCTCAGCAGTCAACCTGCAGCTCAATGAGCTGATAGAGC
ATATTGCAACTTTCGCGCTTAATTATAAAATTAAGTACAATGAAGACAATAAATTGATTGCGCAGATAGATGAATACCTG
GACGACACCTTTATGTTGTTCAGCAGCTATGGTATTAATACGCAGGATTTGCAAAAATGGCGTAAATCGGGCAACCGCCT
GTTCCGTTGTTTCGTCAACGCCACCAGGGCTAATCCTGTTAGTTTGTCTTGTTAA
ATGGACGAATACTCACCCAAAAGACATGATATAGCACAGCTTAAATTTCTTTGCGAAACCCTGTATCATGACTGTCTTGC
AAACCTTGAAGAAAGCAACCATGGCTGGGTTAATGACCCGACCTCAGCAGTCAACCTGCAGCTCAATGAGCTGATAGAGC
ATATTGCAACTTTCGCGCTTAATTATAAAATTAAGTACAATGAAGACAATAAATTGATTGCGCAGATAGATGAATACCTG
GACGACACCTTTATGTTGTTCAGCAGCTATGGTATTAATACGCAGGATTTGCAAAAATGGCGTAAATCGGGCAACCGCCT
GTTCCGTTGTTTCGTCAACGCCACCAGGGCTAATCCTGTTAGTTTGTCTTGTTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A656IQ80 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| PDB | 7AK7 | |
| AlphaFold DB | A0A5I1DGA4 |