Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | kacAT/DUF1778(antitoxin) |
| Location | 3574391..3575188 | Replicon | chromosome |
| Accession | NZ_CP085748 | ||
| Organism | Enterobacter hormaechei strain 59732CZ | ||
Toxin (Protein)
| Gene name | KacT | Uniprot ID | - |
| Locus tag | LJU46_RS17575 | Protein ID | WP_045141441.1 |
| Coordinates | 3574391..3574912 (-) | Length | 174 a.a. |
Antitoxin (Protein)
| Gene name | KacA | Uniprot ID | F5RT92 |
| Locus tag | LJU46_RS17580 | Protein ID | WP_001303459.1 |
| Coordinates | 3574919..3575188 (-) | Length | 90 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LJU46_RS17545 (LJU46_17545) | 3569989..3570678 | + | 690 | WP_045141445.1 | pyrimidine utilization protein B | - |
| LJU46_RS17550 (LJU46_17550) | 3570690..3571076 | + | 387 | WP_015570870.1 | pyrimidine utilization protein C | - |
| LJU46_RS17555 (LJU46_17555) | 3571084..3571884 | + | 801 | WP_039271149.1 | pyrimidine utilization protein D | - |
| LJU46_RS17560 (LJU46_17560) | 3571894..3572484 | + | 591 | WP_062934089.1 | malonic semialdehyde reductase | - |
| LJU46_RS17565 (LJU46_17565) | 3572497..3572988 | + | 492 | WP_045141443.1 | pyrimidine utilization flavin reductase protein F | - |
| LJU46_RS17570 (LJU46_17570) | 3573010..3574332 | + | 1323 | WP_045141442.1 | pyrimidine utilization transport protein G | - |
| LJU46_RS17575 (LJU46_17575) | 3574391..3574912 | - | 522 | WP_045141441.1 | GNAT family N-acetyltransferase | Toxin |
| LJU46_RS17580 (LJU46_17580) | 3574919..3575188 | - | 270 | WP_001303459.1 | DUF1778 domain-containing protein | Antitoxin |
| LJU46_RS17585 (LJU46_17585) | 3575262..3576167 | - | 906 | WP_045141440.1 | DMT family transporter | - |
| LJU46_RS17590 (LJU46_17590) | 3576284..3576454 | - | 171 | WP_001273664.1 | general stress protein | - |
| LJU46_RS17595 (LJU46_17595) | 3576846..3577442 | + | 597 | WP_006809323.1 | NAD(P)H:quinone oxidoreductase | - |
| LJU46_RS17600 (LJU46_17600) | 3577461..3577688 | + | 228 | WP_006809324.1 | YccJ family protein | - |
| LJU46_RS17605 (LJU46_17605) | 3577721..3578962 | - | 1242 | WP_017693667.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| LJU46_RS17610 (LJU46_17610) | 3579115..3579210 | + | 96 | Protein_3435 | transcriptional regulator | - |
| LJU46_RS17615 (LJU46_17615) | 3579289..3579648 | - | 360 | WP_017384779.1 | helix-turn-helix domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 174 a.a. Molecular weight: 19407.16 Da Isoelectric Point: 7.4318
>T221198 WP_045141441.1 NZ_CP085748:c3574912-3574391 [Enterobacter hormaechei]
VANLTIEMLSEGTDYDFGDFDCGEPSLNAFLTEHLVRQHGGRILRGYLLKERDHPRVLGYYTLSGSCFEKAMLPSKTQQR
RIPYSNVPSVTLGRLAVHKELQGNEWGTALVTHAMRVVYLASQAVGVHGIFVDALNERAKRFYLKLGFIPLAGENSSSLF
FPTQSIERLFEQA
VANLTIEMLSEGTDYDFGDFDCGEPSLNAFLTEHLVRQHGGRILRGYLLKERDHPRVLGYYTLSGSCFEKAMLPSKTQQR
RIPYSNVPSVTLGRLAVHKELQGNEWGTALVTHAMRVVYLASQAVGVHGIFVDALNERAKRFYLKLGFIPLAGENSSSLF
FPTQSIERLFEQA
Download Length: 522 bp
>T221198 NZ_CP117357:c4667466-4667155 [Salmonella enterica subsp. enterica serovar Typhimurium]
ATGCAATTTATAGAAACGGAACTCTTTACTGAAGATGTTAAAAAACTGCTCGATGATGATGAATACCATAAGCTTCAGGT
TTTTATGGCTCAGCATCCAGATTGTGGTGATGTCATTCAGGAAACGGGCGGCCTGAGAAAAATGCGCTGGGGAGCGCGAG
GCAAAGGAAAGCGTAGTGGCGTGCGAATTATCTATTTTCACCGTAGTCAACGGTATGAGATTCGCTTGCTTCTGATTTAT
CAAAAAGGCATTAAAGATGATCTCACGCCGCAGGAAAAAGCGGTGCTTCGTATGCTGAATGAGAGGTGGTAG
ATGCAATTTATAGAAACGGAACTCTTTACTGAAGATGTTAAAAAACTGCTCGATGATGATGAATACCATAAGCTTCAGGT
TTTTATGGCTCAGCATCCAGATTGTGGTGATGTCATTCAGGAAACGGGCGGCCTGAGAAAAATGCGCTGGGGAGCGCGAG
GCAAAGGAAAGCGTAGTGGCGTGCGAATTATCTATTTTCACCGTAGTCAACGGTATGAGATTCGCTTGCTTCTGATTTAT
CAAAAAGGCATTAAAGATGATCTCACGCCGCAGGAAAAAGCGGTGCTTCGTATGCTGAATGAGAGGTGGTAG
Antitoxin
Download Length: 90 a.a. Molecular weight: 10248.70 Da Isoelectric Point: 5.8836
>AT221198 WP_001303459.1 NZ_CP085748:c3575188-3574919 [Enterobacter hormaechei]
MPALKKQRIDLRLSDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNEASWNAVMDAIDNPPEPNERLKR
AAKRLRNME
MPALKKQRIDLRLSDEDKTMIEEAAAMTNQTITQFMVNSASERAAEVIEQHRRLVLNEASWNAVMDAIDNPPEPNERLKR
AAKRLRNME
Download Length: 270 bp
>AT221198 NZ_CP117357:c4667154-4666864 [Salmonella enterica subsp. enterica serovar Typhimurium]
ATGGATAAAGTGTTATTTGAGCGATTAACTCAAAGTATGTCTCAAATGAATGAAATCATTGAAGGGACCCGTGAACCTTC
TCGTACCTTTCATATTGATGCAATGAAGATTAAAGAAATACGGCAGGCATCTGGGTTGTCGCAATCTAAGTTTGCAGAGC
TGATTTCGGTCAACGTGGATACGCTGCGCAACTGGGAGCAAGGAAGACGTTCACCGACAGGGCCAGCCAAAGCGTTACTT
CGCGCCATTGCCAACGACCCGAGAAACGTTATACAAGCATTGCGTTATTGA
ATGGATAAAGTGTTATTTGAGCGATTAACTCAAAGTATGTCTCAAATGAATGAAATCATTGAAGGGACCCGTGAACCTTC
TCGTACCTTTCATATTGATGCAATGAAGATTAAAGAAATACGGCAGGCATCTGGGTTGTCGCAATCTAAGTTTGCAGAGC
TGATTTCGGTCAACGTGGATACGCTGCGCAACTGGGAGCAAGGAAGACGTTCACCGACAGGGCCAGCCAAAGCGTTACTT
CGCGCCATTGCCAACGACCCGAGAAACGTTATACAAGCATTGCGTTATTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|