Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/HTH_26(antitoxin)
Location 745470..746054 Replicon chromosome
Accession NZ_CP084696
Organism Rhizobium ruizarguesonis strain RCAM 1026

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag BSO17_RS03675 Protein ID WP_024320991.1
Coordinates 745470..745697 (+) Length 76 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID C6B0G5
Locus tag BSO17_RS03680 Protein ID WP_003545376.1
Coordinates 745707..746054 (+) Length 116 a.a.

Genomic Context

BSO17_RS03635BSO17_RS03640BSO17_RS03645BSO17_RS03650BSO17_RS03655BSO17_RS03660BSO17_RS03665BSO17_RS03675BSO17_RS03680BSO17_RS03685BSO17_RS03690BSO17_RS03695BSO17_RS03700
Location: 740951..741382 (432 bp)
Type: Others
Protein ID: WP_012755989.1
Location: 741438..742736 (1299 bp)
Type: Others
Protein ID: WP_024320994.1
Location: 742741..743214 (474 bp)
Type: Others
Protein ID: WP_018493697.1
Location: 743211..743696 (486 bp)
Type: Others
Protein ID: WP_024320993.1
Location: 743820..744038 (219 bp)
Type: Others
Protein ID: WP_003545338.1
Location: 744096..744716 (621 bp)
Type: Others
Protein ID: WP_003545339.1
Location: 744852..745064 (213 bp)
Type: Others
Protein ID: WP_024320992.1
Location: 745470..745697 (228 bp)
Type: Toxin
Protein ID: WP_024320991.1
Location: 745707..746054 (348 bp)
Type: Antitoxin
Protein ID: WP_003545376.1
Location: 746343..746621 (279 bp)
Type: Others
Protein ID: WP_024320990.1
Location: 746629..748074 (1446 bp)
Type: Others
Protein ID: WP_075224284.1
Location: 748089..749804 (1716 bp)
Type: Others
Protein ID: WP_075224285.1
Location: 749895..750470 (576 bp)
Type: Others
Protein ID: WP_018072494.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
BSO17_RS03635 (BSO17_03635)740951..741382+432WP_012755989.1DUF2948 family protein-
BSO17_RS03640 (BSO17_03640)741438..742736+1299WP_024320994.1histidinol dehydrogenase-
BSO17_RS03645 (BSO17_03645)742741..743214+474WP_018493697.1UPF0262 family protein-
BSO17_RS03650 (BSO17_03650)743211..743696+486WP_024320993.1low molecular weight phosphatase family protein-
BSO17_RS03655 (BSO17_03655)743820..744038+219WP_003545338.1translation initiation factor IF-1-
BSO17_RS03660 (BSO17_03660)744096..744716+621WP_003545339.1Maf-like protein-
BSO17_RS03665 (BSO17_03665)744852..745064+213WP_024320992.1DNA gyrase inhibitor YacG-
BSO17_RS03675 (BSO17_03675)745470..745697+228WP_024320991.1cytotoxic translational repressor of toxin-antitoxin stability systemToxin
BSO17_RS03680 (BSO17_03680)745707..746054+348WP_003545376.1helix-turn-helix transcriptional regulatorAntitoxin
BSO17_RS03685 (BSO17_03685)746343..746621-279WP_024320990.1transposase-
BSO17_RS03690 (BSO17_03690)746629..748074-1446WP_075224284.1HlyD family type I secretion periplasmic adaptor subunit-
BSO17_RS03695 (BSO17_03695)748089..749804-1716WP_075224285.1type I secretion system permease/ATPase-
BSO17_RS03700 (BSO17_03700)749895..750470-576WP_018072494.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Cro/C1-type helix-turn-helix domain

(60-114)


Sequences

Toxin        


Download         Length: 76 a.a.        Molecular weight: 8429.92 Da        Isoelectric Point: 10.4125

>T219168 WP_024320991.1 NZ_CP084696:745470-745697 [Rhizobium ruizarguesonis]
MKKIAYSKAAAKALRKMQPKRAAAIVANGEMVDLKKLQDSEFFRIRVGQDRVIIDDQTMQVLVIKAGPHGDIYNE

Download         Length: 228 bp

>T219168 NZ_CP116194:c612497-612156 [Escherichia coli]
ATGACTGACACGCATTCTATTGCACAACCGTTCGAAGCAGAAGTCTCCCCGGCAAATAACCGTCAATTAACCGTGAGTTA
TGCGAGTCGCTACCCGGATTACAGCCGTATTCCCGCCATCACCCTGAAAGGTCAGTGGCTGGAAGCCGCCGGTTTTGCCA
CCGGCACTGCGGTAGATGTCAAAGTAATGGAAGGCTGTATTGTCCTCACCGCCCAACCACCCGCCGCCGCCGAGAGCGAA
CTGATGCAGTCGCTGCGCCAGGTGTGCAAGCTGTCGGCGCGTAAACAAAGGCAGGTGCAGGAGTTTATTGGGGTGATTGC
GGGTAAACAGAAAGTCGCCTGA

Antitoxin


Download         Length: 116 a.a.        Molecular weight: 12534.06 Da        Isoelectric Point: 4.2544

>AT219168 WP_003545376.1 NZ_CP084696:745707-746054 [Rhizobium ruizarguesonis]
MGEIQKLTIDGKGYVLLSEDDYQDLVDVSDARAAKARIDAGEETWPEDVVKALIAGEDPVRVFRKHRGMSIKELAEKSGL
SQPYLSEIETGKKEGSLDALRSIASALDVDLDDVA

Download         Length: 348 bp

>AT219168 NZ_CP116194:612492-612568 [Escherichia coli]
AGTCATAACTGCTATTCCCTATAAATAGTGATTGTGATTAGCGGTGCGGGTGTGTTGGCGCACATCCGCACCGCGCT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
AlphaFold DBA0A3S3VVG8

References