Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) FicTA/Fic(toxin)
Location 1568472..1568935 Replicon chromosome
Accession NC_008786
Organism Verminephrobacter eiseniae EF01-2

Toxin (Protein)


Gene name VbhT Uniprot ID -
Locus tag VEIS_RS29660 Protein ID WP_198137966.1
Coordinates 1568472..1568750 (-) Length 93 a.a.

Antitoxin (Protein)


Gene name VbhA Uniprot ID A1WHR5
Locus tag VEIS_RS06870 Protein ID WP_011809181.1
Coordinates 1568747..1568935 (-) Length 63 a.a.

Genomic Context

VEIS_RS29645VEIS_RS29650VEIS_RS06885VEIS_RS06890VEIS_RS06895VEIS_RS06830VEIS_RS06835VEIS_RS06840VEIS_RS06845VEIS_RS06850VEIS_RS06855VEIS_RS29655VEIS_RS29660VEIS_RS06870VEIS_RS06875VEIS_RS06880
Location: 1567130..1567564 (435 bp)
Type: Others
Protein ID: Protein_1458
Location: 1567562..1567894 (333 bp)
Type: Others
Protein ID: Protein_1459
Location: 1571635..1572546 (912 bp)
Type: Others
Protein ID: WP_011809184.1
Location: 1572599..1572925 (327 bp)
Type: Others
Protein ID: WP_011809185.1
Location: 1572922..1573494 (573 bp)
Type: Others
Protein ID: WP_011809186.1
Location: 1564478..1565035 (558 bp)
Type: Others
Protein ID: WP_011809175.1
Location: 1565029..1565400 (372 bp)
Type: Others
Protein ID: WP_011809176.1
Location: 1565397..1565723 (327 bp)
Type: Others
Protein ID: WP_011809177.1
Location: 1565747..1566142 (396 bp)
Type: Others
Protein ID: WP_011809178.1
Location: 1566306..1566683 (378 bp)
Type: Others
Protein ID: WP_011809179.1
Location: 1566680..1566970 (291 bp)
Type: Others
Protein ID: WP_011809180.1
Location: 1568142..1568414 (273 bp)
Type: Others
Protein ID: WP_198137964.1
Location: 1568472..1568750 (279 bp)
Type: Toxin
Protein ID: WP_198137966.1
Location: 1568747..1568935 (189 bp)
Type: Antitoxin
Protein ID: WP_011809181.1
Location: 1569000..1569464 (465 bp)
Type: Others
Protein ID: WP_011809182.1
Location: 1570003..1571357 (1355 bp)
Type: Others
Protein ID: Protein_1464
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
VEIS_RS068301564478..1565035-558WP_011809175.1recombinase family protein-
VEIS_RS068351565029..1565400-372WP_011809176.1hypothetical protein-
VEIS_RS068401565397..1565723-327WP_011809177.1hypothetical protein-
VEIS_RS068451565747..1566142-396WP_011809178.1hypothetical protein-
VEIS_RS068501566306..1566683-378WP_011809179.1DUF86 domain-containing protein-
VEIS_RS068551566680..1566970-291WP_011809180.1nucleotidyltransferase-
VEIS_RS296451567130..1567564+435Protein_1458DUF4158 domain-containing protein-
VEIS_RS296501567562..1567894+333Protein_1459Tn3 family transposase-
VEIS_RS296551568142..1568414-273WP_198137964.1Fic family protein-
VEIS_RS296601568472..1568750-279WP_198137966.1Fic family proteinToxin
VEIS_RS068701568747..1568935-189WP_011809181.1antitoxin VbhA family proteinAntitoxin
VEIS_RS068751569000..1569464-465WP_011809182.1hypothetical protein-
VEIS_RS068801570003..1571357-1355Protein_1464IS4 family transposase-
VEIS_RS068851571635..1572546+912WP_011809184.1hypothetical protein-
VEIS_RS068901572599..1572925+327WP_011809185.1type II toxin-antitoxin system PrlF family antitoxin-
VEIS_RS068951572922..1573494+573WP_011809186.1type II toxin-antitoxin system YhaV family toxin-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

Antitoxin VbhA-like

(4-57)


Sequences

Toxin        


Download         Length: 93 a.a.        Molecular weight: 10411.85 Da        Isoelectric Point: 9.5348

>T21915 WP_198137966.1 NC_008786:c1568750-1568472 [Verminephrobacter eiseniae EF01-2]
MKYAGDRGDPYLDSETGVLRNLLGIKEQGGLDKAESTLSFLRASELREQPVKGKFDLAHLQRIHKRLFGDVYDWAGQIRQ
VEISKGSTMFAR

Download         Length: 279 bp

>T21915 NC_008786:c1568750-1568472 [Verminephrobacter eiseniae EF01-2]
ATGAAATACGCCGGGGATCGCGGCGATCCTTACCTGGACAGCGAAACGGGTGTTCTCCGCAATCTCCTTGGAATCAAGGA
ACAGGGTGGACTCGATAAAGCCGAATCCACCCTTTCCTTTTTGCGGGCCAGCGAATTGCGCGAGCAGCCCGTTAAAGGCA
AATTCGATTTAGCGCACCTGCAGCGAATTCACAAGCGCCTTTTTGGCGACGTGTACGACTGGGCGGGCCAAATCCGCCAG
GTCGAAATCTCGAAAGGCAGCACTATGTTTGCCCGGTAG

Antitoxin


Download         Length: 63 a.a.        Molecular weight: 6890.76 Da        Isoelectric Point: 4.4982

>AT21915 WP_011809181.1 NC_008786:c1568935-1568747 [Verminephrobacter eiseniae EF01-2]
MISEQEQTERRAVVQSALASQRIEGLEPDAQAVADAERWARGEMAIGAAVDQYKARMRLEMA

Download         Length: 189 bp

>AT21915 NC_008786:c1568935-1568747 [Verminephrobacter eiseniae EF01-2]
ATGATCTCAGAGCAGGAACAAACCGAGCGCCGCGCCGTGGTGCAAAGCGCCCTTGCGAGCCAGCGCATCGAGGGCTTGGA
GCCTGATGCACAGGCCGTGGCCGACGCCGAACGCTGGGCGCGTGGCGAGATGGCCATCGGTGCCGCCGTGGACCAGTACA
AGGCGCGCATGCGGCTAGAAATGGCATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
AlphaFold DBA1WHR5

References