Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mosAT/AbiEii-AbiEi
Location 607196..608894 Replicon chromosome
Accession NZ_CP084032
Organism Pectobacterium colocasium strain LJ1

Toxin (Protein)


Gene name mosT Uniprot ID -
Locus tag LCF41_RS02755 Protein ID WP_225088086.1
Coordinates 607196..608125 (-) Length 310 a.a.

Antitoxin (Protein)


Gene name mosA Uniprot ID -
Locus tag LCF41_RS02760 Protein ID WP_225086791.1
Coordinates 608112..608894 (-) Length 261 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LCF41_RS02730 602889..604025 + 1137 WP_225086786.1 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase -
LCF41_RS02735 604028..604597 + 570 WP_225086787.1 ribose 1,5-bisphosphokinase -
LCF41_RS02740 604636..605421 + 786 WP_225086788.1 phosphonate metabolism protein PhnP -
LCF41_RS02745 605594..605857 - 264 WP_225086789.1 DUF2798 domain-containing protein -
LCF41_RS02750 605986..606888 + 903 WP_225086790.1 LysR family transcriptional regulator -
LCF41_RS02755 607196..608125 - 930 WP_225088086.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
LCF41_RS02760 608112..608894 - 783 WP_225086791.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein Antitoxin
LCF41_RS02770 609356..609817 + 462 WP_225086792.1 hypothetical protein -
LCF41_RS02775 609814..610023 + 210 WP_225086793.1 helix-turn-helix transcriptional regulator -
LCF41_RS02780 610345..610569 + 225 WP_225088088.1 DUF1778 domain-containing protein -
LCF41_RS02785 610687..611811 + 1125 WP_225086794.1 site-specific integrase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(14-261)

Antitoxin

Transcriptional regulator AbiEi antitoxin, N-terminal domain

(2-92)


Sequences

Toxin        


Download         Length: 310 a.a.        Molecular weight: 35030.55 Da        Isoelectric Point: 5.9688

>T217995 WP_225088086.1 NZ_CP084032:c608125-607196 [Pectobacterium colocasium]
IDQRDIYARQVKLLMTSLPYVAKEPCFALKGGTAINLFVQDFPRLSVDIDLVYQTFIDRDTDLIAIDDALMRITESLNGR
PGITAIRQENKADEKRIIVNTVDAQIKIEVSPVWRGLLLPPAEMPICEQVEMEFGFTIMNVVSLADLYGGKICAALDRQH
PRDLFDVLNMLEKPGLTRELFDGFLCYLAGHPRPIAELLAPNWDIARIATLYQQEFSGMAQHETSLESLLSVTTLLPQAL
KSHFTAQDKQFLLGYKQNTPDWSLYRYPDIQHLPAIRWKQRNLSALHAKNPAKFSAAVGKLEKVLEQCF

Download         Length: 930 bp

>T217995 NZ_CP115158:c1198571-1197825 [Bacillus amyloliquefaciens]
ATGCTTTTGTTTTTTCAGATCATGGTGTGGACGATGGCGGCCGCACTCATTTTATATGTGTACGCATCCTGGCGGTATGA
AGCAAAGGTAAAAGAAAAAATGTTTGCCATCCGTAAAACGTGGTATTTACTATTTGTAGTAGGCGCCATGGTCTATTGGA
CATATGATCCCGAATCGCTCTTTGCCGCATGGAGACAATATTTGATTGTTGCCGTCTGCTTTGCCCTTATTGATGCGTTT
ATCTTTTTGAGCGCGTATATCAAAAAGCTCGCCGGCAATGAATTAGAGACGGATACGCGGGAAATTTTAGAAGAAAATAA
CGAAATGCTTCACTCCTATCTTGAAAAACTGAAAACCTATCAATATCTGTTGAAAAATGAACCGATCCATGTATATTATG
GAAGTACAGAAGCTTATGCGGAAGGCATCAGCAGACTGCTGGCCGCTTATGGAGAAAAAATGAATGTCACGGCTTCCTTG
TGCGAGTATTCCGCACAATCGGATAAGGACCGCTTGACGGAGCATATGCCTGATGCGGCGGACGTTCAGTCCCGTCTTAA
CCGTAAAGACGTCTACTATGATCAAAAAGGCAGGCTTGTGCTTATTCCGTTTACAGTCCAGGACCGCCATTACGTGATCA
AACTCACGTCGGAAAACCTGTTGACGGAATTCGATTATTTGCTTTTCACATCGCTAACGAGCATTTATGATTTAATGCTG
CCAATAGAAGAGGAAGGTGACGGTTAA

Antitoxin


Download         Length: 261 a.a.        Molecular weight: 29415.84 Da        Isoelectric Point: 9.1333

>AT217995 WP_225086791.1 NZ_CP084032:c608894-608112 [Pectobacterium colocasium]
MTNYLNWMMQNTLPGQVLLQSWLTRNGIDRKLSYVYVQNGWLRRIAHGVYCRTGREPDWVDAVYCLQTQWEKPVRVAGLT
SLALQGYSHYTELGKPQIWLTLPAYITLPGWFAAFEKSATFVVIYTSGLSVDVMPFTTELKIGDRRLTGSVPELAAYEIA
SGVPTQISFEHADALFQGLHLLSPRKLQALLCASHSVKTNRVMLYLAQRNGHPYFQYLDKSGIEIGAGKRQIVPGGWLEP
DYQITVPREFKSKGIEDRSA

Download         Length: 783 bp

>AT217995 NZ_CP115158:c1197824-1197654 [Bacillus amyloliquefaciens]
ATGGAGCAGGCATTTCAAAACGGGCAGCCGGAACAAAGAGCGAAACCGTTCAAAATGTTTAAAAAACGTTCAATGACAAG
TATCGCAAGTTACCAGGTCAGCCCTCATACCGCCAGAATTTTCAAAGAAAACGAGCGGCTGATTGACAAGTATAAACAAA
AAAAAGCTTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References