Detailed information of TA system TA215531

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): relBE/YafQ-RelB
• Location: 1013951..1014491
• Replicon: chromosome
• Accession: NZ_CP082909
• Organism: Endozoicomonas sp. 4G

Toxin (Protein)

• Gene name: relE
• Uniprot ID: -
• Locus tag: K7B67_RS03825
• Protein ID: WP_252179054.1
• Coordinates: 1013951..1014223 (-)
• Length: 91 a.a.

Antitoxin (Protein)

• Gene name: relB
• Uniprot ID: -
• Locus tag: K7B67_RS03830
• Protein ID: WP_252179055.1
• Coordinates: 1014213..1014491 (-)
• Length: 93 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
K7B67_RS03815	1011527..1012345	+	819	WP_252179052.1	hypothetical protein	-
K7B67_RS03820	1012418..1013623	-	1206	WP_252179053.1	hypothetical protein	-
K7B67_RS03825	1013951..1014223	-	273	WP_252179054.1	type II toxin-antitoxin system YafQ family toxin	Toxin
K7B67_RS03830	1014213..1014491	-	279	WP_252179055.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	Antitoxin
K7B67_RS03835	1014618..1014917	-	300	WP_252179056.1	hypothetical protein	-
K7B67_RS03840	1015067..1016560	-	1494	WP_252179057.1	dGTPase	-
K7B67_RS03845	1016557..1017819	-	1263	WP_252179058.1	SGNH/GDSL hydrolase family protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Toxin-antitoxin system, YafQ-like toxin (3-90)

Antitoxin

• RelB antitoxin/Antitoxin DinJ (4-84)

Sequences

Toxin

Protein

• Length: 91 a.a.
• Molecular weight: 10348.99 Da
• Isoelectric Point: 9.5753

>T215531 WP_252179054.1 NZ_CP082909:c1014223-1013951 [Endozoicomonas sp. 4G]
MMYSLEYSNQFKKDFKKVTKLAITDIIAAGHVIGTLQRGQTLDARHVDHALVGDWLGFRDCHIKPDLVLIYRTHDRKLQL
ARIGSHSDLF

Nucleotide

• Length: 273 bp

>T215531 NZ_CP110811:2454-2747 [Pseudomonas syringae]
ATGCTACCCATTTTCTGGCTAGAATCAGCGGACAACGATTTGGCGGCAATAATCGAATACATAGGTTCACGTGATATAGC
TGCTGCCGAAAGGTTATGGCAGCGCTTGCGTGGCATCGTTCTGCCCCTTTCAGAACATCCTTATCTGTATGCGATAAGTG
ACCGCGTCCCAGGAATGCGCGAGATCGTTGCCCATCCTAACTACCTGGTGTTTTATCGTGTCACCTCAACGCGCATAGAA
GTGGTGAACGTCGTCCACGCACGGCAAGAATATCCCCAAACTGGACTAGCGTAG

Antitoxin

Protein

• Length: 93 a.a.
• Molecular weight: 9880.17 Da
• Isoelectric Point: 5.5813

>AT215531 WP_252179055.1 NZ_CP082909:c1014491-1014213 [Endozoicomonas sp. 4G]
MRQEMLSARIDHDTKAAFTNICEAVGLSTSQAINIFAKAVINHGGIPFELRVQQPNKTSVAAMKELDEGKGHSAESVSAL
INELTDGKVNDV

Nucleotide

• Length: 279 bp

>AT215531 NZ_CP110811:2269-2454 [Pseudomonas syringae]
ATGATTGATCGTTCGCCTATCGTTTCGGAGTTTGAAACTGAAGAGCTAGAGGCCAATTACACCGCCTGGCTACGCGCGAA
GGTGGAGGCCAGTCTGGCCGACTCGCGCCCTGCTATCCCGCATGATGAAGTCGAGAGAAGGATGGCAGAGCGGCTGGCAC
GATTGCGCCATCGCCGAGCGTCCTGA