Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/RelE(toxin) |
| Location | 439319..439890 | Replicon | chromosome |
| Accession | NZ_CP082787 | ||
| Organism | Serratia entomophila strain A1 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | A0A6M5HME0 |
| Locus tag | KHA73_RS02070 | Protein ID | WP_061799809.1 |
| Coordinates | 439615..439890 (+) | Length | 92 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | A0A086G7I5 |
| Locus tag | KHA73_RS02065 | Protein ID | WP_013811307.1 |
| Coordinates | 439319..439606 (+) | Length | 96 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHA73_RS02040 (KHA73_02040) | 434968..436053 | - | 1086 | WP_234588035.1 | carbon-phosphorus lyase complex subunit PhnI | - |
| KHA73_RS02045 (KHA73_02045) | 436053..436634 | - | 582 | WP_234588036.1 | phosphonate C-P lyase system protein PhnH | - |
| KHA73_RS02050 (KHA73_02050) | 436637..437080 | - | 444 | WP_234588038.1 | phosphonate C-P lyase system protein PhnG | - |
| KHA73_RS02055 (KHA73_02055) | 437081..437809 | - | 729 | WP_234588040.1 | phosphonate metabolism transcriptional regulator PhnF | - |
| KHA73_RS02060 (KHA73_02060) | 438155..439213 | + | 1059 | WP_234591168.1 | permease | - |
| KHA73_RS02065 (KHA73_02065) | 439319..439606 | + | 288 | WP_013811307.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin |
| KHA73_RS02070 (KHA73_02070) | 439615..439890 | + | 276 | WP_061799809.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin |
| KHA73_RS02075 (KHA73_02075) | 439896..440360 | - | 465 | WP_234588049.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
| KHA73_RS02080 (KHA73_02080) | 440556..442694 | - | 2139 | WP_234588051.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| KHA73_RS02085 (KHA73_02085) | 442900..443814 | - | 915 | WP_234588052.1 | LysR family transcriptional regulator | - |
| KHA73_RS02090 (KHA73_02090) | 443919..444443 | + | 525 | WP_234588062.1 | NAD(P)H-dependent oxidoreductase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 92 a.a. Molecular weight: 10766.50 Da Isoelectric Point: 8.4940
>T215040 WP_061799809.1 NZ_CP082787:439615-439890 [Serratia entomophila]
MRIEWDNAALRDRERIFEFLYIFNPQAAEQADNEIDKAVKRLLDHPELGKPWYGKARKLLINKASLLLVYIIVDDVIKVF
SIAHQREKFPN
MRIEWDNAALRDRERIFEFLYIFNPQAAEQADNEIDKAVKRLLDHPELGKPWYGKARKLLINKASLLLVYIIVDDVIKVF
SIAHQREKFPN
Download Length: 276 bp
>T215040 NZ_CP110373:3168616-3169185 [Proteus mirabilis]
ATGACAAACTATACTGTTTTGCTTGATGCCTGTGTCATGTATCCAGCCCCTCTTAGAAGTTATTTAATGTATCTTGCTAA
TACTGGTTTATTTAGAGCACGTTGGAGTAATCAGATCCATGATGAATGGATCACTAATTTATTAGTCAACAATCCAACAT
TAACAGCTGAGCGACTAATACGAACCAGAGATTTAATGAATGCACATGTTCCTGATTGTTTAGTAGAAGGCTACGAATCG
CTTATTTGTGGTTTAAAGCTACCTGATCCTAATGATCGTCATGTGCTAGTAGCAGCAATAAAAGGACAGGCTCAAGCTAT
AATTACATTTAACTTAAAAGATTTTCCGCAAAAATACCTTAATTCTTTTGATATTTCAGCTATCCATCCTGATGAATTTT
TGAGTGACATGTTTGAATTAAATCCTAGTAGCTGTATTAAAGCGGCGCAACAACATAGACAAAGCCTAAAGAATCCACCA
ATGACCGTAGAGACCTTTTTAGGCTGTTTACAAAAGCAGAAATTACCCCAGTTTATTTCCCATTTACGGGCATTCCAGAT
ATTATTATAA
ATGACAAACTATACTGTTTTGCTTGATGCCTGTGTCATGTATCCAGCCCCTCTTAGAAGTTATTTAATGTATCTTGCTAA
TACTGGTTTATTTAGAGCACGTTGGAGTAATCAGATCCATGATGAATGGATCACTAATTTATTAGTCAACAATCCAACAT
TAACAGCTGAGCGACTAATACGAACCAGAGATTTAATGAATGCACATGTTCCTGATTGTTTAGTAGAAGGCTACGAATCG
CTTATTTGTGGTTTAAAGCTACCTGATCCTAATGATCGTCATGTGCTAGTAGCAGCAATAAAAGGACAGGCTCAAGCTAT
AATTACATTTAACTTAAAAGATTTTCCGCAAAAATACCTTAATTCTTTTGATATTTCAGCTATCCATCCTGATGAATTTT
TGAGTGACATGTTTGAATTAAATCCTAGTAGCTGTATTAAAGCGGCGCAACAACATAGACAAAGCCTAAAGAATCCACCA
ATGACCGTAGAGACCTTTTTAGGCTGTTTACAAAAGCAGAAATTACCCCAGTTTATTTCCCATTTACGGGCATTCCAGAT
ATTATTATAA
Antitoxin
Download Length: 96 a.a. Molecular weight: 11032.33 Da Isoelectric Point: 5.8001
>AT215040 WP_013811307.1 NZ_CP082787:439319-439606 [Serratia entomophila]
MESRIQFRIEDETKRLAQKAAEAKGTTLSEACRRLAEQMADEQRAAEEHENWLKDKVDAAFSRLHEGNAVYLSQQEVEES
MDAFKAKIRAKYDRK
MESRIQFRIEDETKRLAQKAAEAKGTTLSEACRRLAEQMADEQRAAEEHENWLKDKVDAAFSRLHEGNAVYLSQQEVEES
MDAFKAKIRAKYDRK
Download Length: 288 bp
>AT215040 NZ_CP110373:3168164-3168616 [Proteus mirabilis]
ATGAATACGATAAGTGAGAGACTTAGTGCTGAAGATATTGCATTAGCAAAATTAAGTAGCCAAGAGCTATCCGCTGTTAT
GGATATTAATGGCAAAACGCAGAAGCTATCCCTTATAGATAAGACGGGTAATAATCATATTGTACAAATACCAAATAGTG
CATTACGCCTAATGATTGAAATTCTTACTCAACTAGGGCAAGGGAATACTGTTAGTATCACACCAATCCATGCTGAGCTA
ACGACACAGGAAGCGGCTGATATACTCAATATGTCCCGTCCTACATTTGTAAAATTATTAGATACACGAGCGATACCCTA
CTCTAGAAAAGGAAATCGTAGGAAAGTTGCTTATGCTGATATTATTGCTTATAAAAATGAATTGGAGCAAAAACGACTTG
ATGCCCTTGCTGAATTATCGCAATTAGATCAAGAAATGGATATGGGGTATTAA
ATGAATACGATAAGTGAGAGACTTAGTGCTGAAGATATTGCATTAGCAAAATTAAGTAGCCAAGAGCTATCCGCTGTTAT
GGATATTAATGGCAAAACGCAGAAGCTATCCCTTATAGATAAGACGGGTAATAATCATATTGTACAAATACCAAATAGTG
CATTACGCCTAATGATTGAAATTCTTACTCAACTAGGGCAAGGGAATACTGTTAGTATCACACCAATCCATGCTGAGCTA
ACGACACAGGAAGCGGCTGATATACTCAATATGTCCCGTCCTACATTTGTAAAATTATTAGATACACGAGCGATACCCTA
CTCTAGAAAAGGAAATCGTAGGAAAGTTGCTTATGCTGATATTATTGCTTATAAAAATGAATTGGAGCAAAAACGACTTG
ATGCCCTTGCTGAATTATCGCAATTAGATCAAGAAATGGATATGGGGTATTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A6M5HME0 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A086G7I5 |