Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | /RES-TIGR02293 |
Location | 2147279..2148207 | Replicon | chromosome |
Accession | NZ_CP082269 | ||
Organism | Enterobacter sp. C2 |
Toxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | K4042_RS10540 | Protein ID | WP_222887641.1 |
Coordinates | 2147731..2148207 (+) | Length | 159 a.a. |
Antitoxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | K4042_RS10535 | Protein ID | WP_144815692.1 |
Coordinates | 2147279..2147731 (+) | Length | 151 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K4042_RS10520 | 2143940..2144077 | + | 138 | WP_072015219.1 | stationary-phase-induced ribosome-associated protein | - |
K4042_RS10525 | 2144282..2145979 | + | 1698 | WP_222887637.1 | NAD-dependent malic enzyme | - |
K4042_RS10530 | 2146189..2147199 | + | 1011 | WP_222887639.1 | alcohol dehydrogenase AdhP | - |
K4042_RS10535 | 2147279..2147731 | + | 453 | WP_144815692.1 | DUF2384 domain-containing protein | Antitoxin |
K4042_RS10540 | 2147731..2148207 | + | 477 | WP_222887641.1 | RES family NAD+ phosphorylase | Toxin |
K4042_RS10545 | 2148217..2150292 | - | 2076 | WP_222887642.1 | glycogen debranching protein GlgX | - |
K4042_RS10550 | 2150366..2152900 | - | 2535 | WP_222887644.1 | malto-oligosyltrehalose synthase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 159 a.a. Molecular weight: 17694.20 Da Isoelectric Point: 4.6362
>T214465 WP_222887641.1 NZ_CP082269:2147731-2148207 [Enterobacter sp. C2]
MTTQLFWRLVKTRYLATAFDGYGARTFGGRWNSRGRECVYLGSSKALCVLETLVHLEIEDIAEGYSFLTIEIPTELIATL
DLNTLPEEWQADPAPLSTQQIGDQWLADVNNGLLLRVPSTITGEWNALFNPEHPDAKTALLSVKAEPFIIDPRLGKRC
MTTQLFWRLVKTRYLATAFDGYGARTFGGRWNSRGRECVYLGSSKALCVLETLVHLEIEDIAEGYSFLTIEIPTELIATL
DLNTLPEEWQADPAPLSTQQIGDQWLADVNNGLLLRVPSTITGEWNALFNPEHPDAKTALLSVKAEPFIIDPRLGKRC
Download Length: 477 bp
>T214465 NZ_CP110087:1979866-1980126 [Moraxella bovis]
ATTGAGGCCTTATTTGTAGCATTAGGGGCGGACATCTCTGAGCGAGCAGGTTCACGCATGGCTGTGGCGCTAAACGGGCA
AGTCATGGTTTTTCATCGCCCACACCCAAGCCCAAATACTGACAAAAGTGCGGTTATGAGCATTAGAAAATGGCTTGATG
GCATGGGTATCACACCATTAGATGACGACAGCCAAACAGACGAATACGCAGACAAACAAACCGACGAACAGGAGCAGACT
CATGAACACAATGACAATTAA
ATTGAGGCCTTATTTGTAGCATTAGGGGCGGACATCTCTGAGCGAGCAGGTTCACGCATGGCTGTGGCGCTAAACGGGCA
AGTCATGGTTTTTCATCGCCCACACCCAAGCCCAAATACTGACAAAAGTGCGGTTATGAGCATTAGAAAATGGCTTGATG
GCATGGGTATCACACCATTAGATGACGACAGCCAAACAGACGAATACGCAGACAAACAAACCGACGAACAGGAGCAGACT
CATGAACACAATGACAATTAA
Antitoxin
Download Length: 151 a.a. Molecular weight: 15996.37 Da Isoelectric Point: 10.4439
>AT214465 WP_144815692.1 NZ_CP082269:2147279-2147731 [Enterobacter sp. C2]
MTMHVFTPKAAAIPHDLLSTLGLPAAAIAAHDSINVGLSATILRSIADKTQLDEVTLLRMAGIDRNTYSRRLNSAEQRFS
PEQSARVYTLARAISAASELFNNNNVRLAQWLSKPAKGLGGKRPAELLSTPAGAEAVLTLVGRLEHGVLS
MTMHVFTPKAAAIPHDLLSTLGLPAAAIAAHDSINVGLSATILRSIADKTQLDEVTLLRMAGIDRNTYSRRLNSAEQRFS
PEQSARVYTLARAISAASELFNNNNVRLAQWLSKPAKGLGGKRPAELLSTPAGAEAVLTLVGRLEHGVLS
Download Length: 453 bp
>AT214465 NZ_CP110087:1980107-1980442 [Moraxella bovis]
ATGAACACAATGACAATTAACAATCATAAAGCCTTAATCACTTTTGACAGTGAGTTAGGACTGTTTCGTGGGGAGTTTAT
CGGATTAAATGGCGGGGCAGATTTTTATGCTGACAGCGTAGATGGTCTCAATGAACAAGGGGCTTTATCCCTGCAAGCCT
TTTTAGATGTATGTCAAGAACAGGGCATTAGCCCTTATCAGTCGTACAGTGGCAAATTTGTCACACGCCTACCCAAAGAG
TTACATCAAAAAATCGCAGAAACTGCTACCGCCAAGGGTATTAGCCTAAACCAGTGGATTAATGAAACACTCAGCCGTGA
AGTTGGCTTTGCCTGA
ATGAACACAATGACAATTAACAATCATAAAGCCTTAATCACTTTTGACAGTGAGTTAGGACTGTTTCGTGGGGAGTTTAT
CGGATTAAATGGCGGGGCAGATTTTTATGCTGACAGCGTAGATGGTCTCAATGAACAAGGGGCTTTATCCCTGCAAGCCT
TTTTAGATGTATGTCAAGAACAGGGCATTAGCCCTTATCAGTCGTACAGTGGCAAATTTGTCACACGCCTACCCAAAGAG
TTACATCAAAAAATCGCAGAAACTGCTACCGCCAAGGGTATTAGCCTAAACCAGTGGATTAATGAAACACTCAGCCGTGA
AGTTGGCTTTGCCTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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