Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 529524..529890 Replicon chromosome
Accession NZ_CP082178
Organism Xanthomonas fragariae strain SHQP01

Toxin (Protein)


Gene name EcnB Uniprot ID -
Locus tag K4A87_RS02460 Protein ID WP_208588796.1
Coordinates 529756..529890 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID -
Locus tag K4A87_RS02455 Protein ID WP_208588793.1
Coordinates 529524..529676 (+) Length 51 a.a.

Genomic Context

K4A87_RS02450K4A87_RS02455K4A87_RS02460K4A87_RS02465K4A87_RS02470K4A87_RS02480K4A87_RS02485K4A87_RS02440K4A87_RS02445K4A87_RS02490
Location: 528492..529415 (924 bp)
Type: Others
Protein ID: WP_208588790.1
Location: 529524..529676 (153 bp)
Type: Antitoxin
Protein ID: WP_208588793.1
Location: 529756..529890 (135 bp)
Type: Toxin
Protein ID: WP_208588796.1
Location: 530215..531504 (1290 bp)
Type: Others
Protein ID: WP_208588797.1
Location: 531597..531761 (165 bp)
Type: Others
Protein ID: WP_208591856.1
Location: 532048..532641 (594 bp)
Type: Others
Protein ID: Protein_460
Location: 532659..533567 (909 bp)
Type: Others
Protein ID: WP_208588801.1
Location: 525480..526496 (1017 bp)
Type: Others
Protein ID: WP_238135624.1
Location: 527614..528297 (684 bp)
Type: Others
Protein ID: WP_208588787.1
Location: 533627..534742 (1116 bp)
Type: Others
Protein ID: WP_208588802.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
K4A87_RS02440 (K4A87_02425)525480..526496-1017WP_238135624.1hypothetical protein-
K4A87_RS02445 (K4A87_02430)527614..528297-684WP_208588787.1dTMP kinase-
K4A87_RS02450 (K4A87_02435)528492..529415+924WP_208588790.1arginase-
K4A87_RS02455 (K4A87_02440)529524..529676+153WP_208588793.1entericidin A/B family lipoproteinAntitoxin
K4A87_RS02460 (K4A87_02445)529756..529890+135WP_208588796.1entericidin A/B family lipoproteinToxin
K4A87_RS02465 (K4A87_02450)530215..531504+1290WP_208588797.1tryptophan--tRNA ligase-
K4A87_RS02470 (K4A87_02455)531597..531761+165WP_208591856.1hypothetical protein-
K4A87_RS02480 (K4A87_02465)532048..532641+594Protein_460drug/metabolite exporter YedA-
K4A87_RS02485 (K4A87_02470)532659..533567+909WP_208588801.1EamA family transporter RarD-
K4A87_RS02490 (K4A87_02475)533627..534742-1116WP_208588802.1alpha/beta fold hydrolase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4443.31 Da        Isoelectric Point: 10.2040

>T214265 WP_208588796.1 NZ_CP082178:529756-529890 [Xanthomonas fragariae]
MKRAIVLLVLSVLSVGMLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T214265 NZ_CP110017:3374449-3374913 [Escherichia coli]
ATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCAGGAAACCTACGACGCTTTAGTTGC
CGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATA
AAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTCTGGGAAAAAT
AAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCAT
TCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGT
TAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAAACAGAAGAAACCCATTGA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5203.17 Da        Isoelectric Point: 9.4952

>AT214265 WP_208588793.1 NZ_CP082178:529524-529676 [Xanthomonas fragariae]
MKRLLTLMVLGLFSVGVMTGCNTVAGAGKDIQRAGSKVEKKADNCSDGKC

Download         Length: 153 bp

>AT214265 NZ_CP110017:3374114-3374449 [Escherichia coli]
ATGCCCGCTAATGCTCGCTCTCACGCTGTACTGACCACTGAATCAAAGGTCACGATACGCGGACAAACAACTATCCCCGC
GCCAGTGCGTGAGGCCTTAAAACTGAAGCCAGGCCAGGACAGCATTCATTACGAAATTCTGCCTGGTGGGCAAGTATTTA
TGTGCCGACTGGGAGATGAACAGGAGGATCATACTATGAATGCATTTTTGCGTTTTCTGGATGCAGATATCCAGAACAAC
CCGCAAAAAACTCGTCCATTCAACATTCAACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGAT
TGGCGACGACGAATAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References