21392

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 431179..431529 Replicon chromosome
Accession NC_007705
Organism Xanthomonas oryzae pv. oryzae MAFF 311018

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag TX61_RS02005 Protein ID WP_011257368.1
Coordinates 431395..431529 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag TX61_RS02000 Protein ID WP_011407410.1
Coordinates 431179..431331 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
TX61_RS01975 427450..428133 - 684 WP_011257363.1 dTMP kinase -
TX61_RS01980 428613..428909 - 297 WP_011257364.1 hypothetical protein -
TX61_RS01985 428916..429155 - 240 WP_011257365.1 hypothetical protein -
TX61_RS01990 429152..429826 - 675 WP_011257366.1 hypothetical protein -
TX61_RS01995 430148..431071 + 924 WP_011407409.1 arginase -
TX61_RS02000 431179..431331 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
TX61_RS02005 431395..431529 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
TX61_RS02010 431773..431982 + 210 WP_011407411.1 CsbD family protein -
TX61_RS02015 432151..433440 + 1290 WP_011257370.1 tryptophan--tRNA ligase -
TX61_RS02020 433493..434515 + 1023 WP_011257371.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T21392 WP_011257368.1 NC_007705:431395-431529 [Xanthomonas oryzae pv. oryzae MAFF 311018]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T21392 NC_007705:431395-431529 [Xanthomonas oryzae pv. oryzae MAFF 311018]
ATGAAGCGTGCAATTGTGCTGCTCGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT21392 WP_011407410.1 NC_007705:431179-431331 [Xanthomonas oryzae pv. oryzae MAFF 311018]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT21392 NC_007705:431179-431331 [Xanthomonas oryzae pv. oryzae MAFF 311018]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References