Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 1662648..1663275 Replicon chromosome
Accession NZ_CP078093
Organism Crassaminicella indica strain 143-21

Toxin (Protein)


Gene name mazF Uniprot ID -
Locus tag KVH43_RS07880 Protein ID WP_218282014.1
Coordinates 1662925..1663275 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID -
Locus tag KVH43_RS07875 Protein ID WP_218282013.1
Coordinates 1662648..1662923 (+) Length 92 a.a.

Genomic Context

KVH43_RS07850KVH43_RS07855KVH43_RS07860KVH43_RS07865KVH43_RS07870KVH43_RS07875KVH43_RS07880KVH43_RS07885
Location: 1657900..1658505 (606 bp)
Type: Others
Protein ID: WP_218282008.1
Location: 1658605..1658970 (366 bp)
Type: Others
Protein ID: WP_255547709.1
Location: 1659001..1660554 (1554 bp)
Type: Others
Protein ID: WP_218282010.1
Location: 1660622..1661251 (630 bp)
Type: Others
Protein ID: WP_218282011.1
Location: 1661326..1662501 (1176 bp)
Type: Others
Protein ID: WP_218282012.1
Location: 1662648..1662923 (276 bp)
Type: Antitoxin
Protein ID: WP_218282013.1
Location: 1662925..1663275 (351 bp)
Type: Toxin
Protein ID: WP_218282014.1
Location: 1663746..1666550 (2805 bp)
Type: Others
Protein ID: WP_218282015.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
KVH43_RS07850 (KVH43_07850)1657900..1658505+606WP_218282008.1hypothetical protein-
KVH43_RS07855 (KVH43_07855)1658605..1658970+366WP_255547709.1holo-ACP synthase-
KVH43_RS07860 (KVH43_07860)1659001..1660554+1554WP_218282010.1NAD(P)H-hydrate dehydratase-
KVH43_RS07865 (KVH43_07865)1660622..1661251+630WP_218282011.1outer-membrane lipoprotein carrier protein LolA-
KVH43_RS07870 (KVH43_07870)1661326..1662501+1176WP_218282012.1alanine racemase-
KVH43_RS07875 (KVH43_07875)1662648..1662923+276WP_218282013.1ribbon-helix-helix protein, CopG familyAntitoxin
KVH43_RS07880 (KVH43_07880)1662925..1663275+351WP_218282014.1type II toxin-antitoxin system PemK/MazF family toxinToxin
KVH43_RS07885 (KVH43_07885)1663746..1666550+2805WP_218282015.1phosphodiester glycosidase family protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(2-113)

Antitoxin

Ribbon-helix-helix protein, CopG

(6-43)


Sequences

Toxin        


Download         Length: 117 a.a.        Molecular weight: 12811.80 Da        Isoelectric Point: 6.4704

>T208980 WP_218282014.1 NZ_CP078093:1662925-1663275 [Crassaminicella indica]
VIVKRGDIFYADLSPVVGSEQGGVRPVLVVQNNIGNKYSPTIIVAAITSQINKAKMPTHVEISASEYGLTKDSVVLLEQV
RTIDKRRLREKIGHSDDEMMDKVNEALLISFGLIDF

Download         Length: 351 bp

>T208980 NZ_CP078093:1662925-1663275 [Crassaminicella indica]
GTGATTGTAAAAAGAGGAGATATTTTTTATGCAGATCTTAGTCCTGTTGTTGGTTCCGAACAAGGAGGGGTAAGACCAGT
TCTTGTAGTTCAGAACAACATCGGGAATAAATATAGTCCAACTATCATTGTGGCAGCAATCACCTCACAAATTAACAAAG
CAAAAATGCCTACCCATGTTGAAATTAGTGCTTCGGAATATGGATTAACAAAGGACTCAGTAGTTTTGTTAGAACAAGTT
CGAACTATTGATAAAAGAAGGTTGAGAGAAAAAATAGGGCACTCCGATGATGAGATGATGGATAAGGTGAATGAGGCGTT
ATTAATTAGCTTTGGATTAATAGATTTTTGA

Antitoxin


Download         Length: 92 a.a.        Molecular weight: 10669.44 Da        Isoelectric Point: 5.2706

>AT208980 WP_218282013.1 NZ_CP078093:1662648-1662923 [Crassaminicella indica]
MAESKRIMISLPNTLLEEVDNIVAIEKRNRSEFIREAMKLYIRERRKIQIRESMKKGYREMGAMNLTLSEVGLDIDMDVL
SNYEAKLAECE

Download         Length: 276 bp

>AT208980 NZ_CP078093:1662648-1662923 [Crassaminicella indica]
ATGGCTGAGTCTAAACGAATTATGATCAGTTTACCAAATACTCTTTTGGAGGAAGTAGATAATATTGTAGCAATAGAGAA
AAGAAATAGAAGTGAATTTATTAGAGAAGCAATGAAATTATATATTCGAGAAAGACGCAAAATTCAAATAAGAGAAAGCA
TGAAAAAGGGTTATAGGGAAATGGGGGCTATGAATTTAACATTATCAGAAGTAGGTTTAGATATAGATATGGATGTATTG
TCAAATTATGAAGCTAAGTTAGCGGAGTGTGAGTAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References