Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/ParE-RelB |
| Location | 6849..7375 | Replicon | plasmid unnamed2 |
| Accession | NZ_CP077412 | ||
| Organism | Enterobacter asburiae strain FDAARGOS 1432 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | S1EXL1 |
| Locus tag | I6L62_RS22440 | Protein ID | WP_000323025.1 |
| Coordinates | 6849..7136 (-) | Length | 96 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | J5W3H0 |
| Locus tag | I6L62_RS22445 | Protein ID | WP_004196370.1 |
| Coordinates | 7136..7375 (-) | Length | 80 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L62_RS22415 (I6L62_22415) | 2222..2530 | - | 309 | WP_023332865.1 | DUF5983 family protein | - |
| I6L62_RS22420 (I6L62_22420) | 2596..3417 | - | 822 | WP_023332864.1 | DUF932 domain-containing protein | - |
| I6L62_RS23655 | 3513..3648 | - | 136 | Protein_5 | single-stranded DNA-binding protein | - |
| I6L62_RS23710 | 3815..3946 | + | 132 | WP_255344245.1 | hypothetical protein | - |
| I6L62_RS22425 (I6L62_22425) | 4228..5436 | - | 1209 | WP_015386429.1 | IS256 family transposase | - |
| I6L62_RS22430 (I6L62_22430) | 5535..5648 | - | 114 | WP_233475035.1 | DUF5431 family protein | - |
| I6L62_RS22435 (I6L62_22435) | 5764..6798 | + | 1035 | Protein_9 | IS481 family transposase | - |
| I6L62_RS22440 (I6L62_22440) | 6849..7136 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin |
| I6L62_RS22445 (I6L62_22445) | 7136..7375 | - | 240 | WP_004196370.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin |
| I6L62_RS23660 | 7400..7498 | + | 99 | Protein_12 | hypothetical protein | - |
| I6L62_RS22450 (I6L62_22450) | 7658..8865 | + | 1208 | WP_117086587.1 | IS3 family transposase | - |
| I6L62_RS22455 (I6L62_22455) | 8977..9342 | + | 366 | WP_009651956.1 | hypothetical protein | - |
| I6L62_RS22460 (I6L62_22460) | 9386..10123 | + | 738 | WP_008460272.1 | HupE/UreJ family protein | - |
| I6L62_RS22465 (I6L62_22465) | 10137..10826 | + | 690 | WP_004196322.1 | hypothetical protein | - |
| I6L62_RS22470 (I6L62_22470) | 10857..12233 | - | 1377 | Protein_17 | chromate efflux transporter | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Non-Mobilizable plasmid | - | - | 1..118412 | 118412 | |
| - | inside | IScluster/Tn | - | - | 4228..8865 | 4637 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 96 a.a. Molecular weight: 11225.22 Da Isoelectric Point: 10.1967
>T207180 WP_000323025.1 NZ_CP077412:c7136-6849 [Enterobacter asburiae]
MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGK
RERSEVYSEAVKRIL
MAYFLDFDERALKEWRKLGSTVREQLKKKLVEVLESPRIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGK
RERSEVYSEAVKRIL
Download Length: 288 bp
>T207180 NZ_CP077412:c7136-6849 [Enterobacter asburiae]
ATGGCGTATTTTCTGGATTTTGACGAGCGGGCACTAAAGGAATGGCGAAAGCTGGGCTCGACGGTACGTGAACAGTTGAA
AAAGAAGCTGGTTGAAGTACTTGAGTCACCCCGGATTGAAGCAAACAAGCTCCGTGGTATGCCTGATTGTTACAAGATTA
AGCTCCGGTCTTCAGGCTATCGCCTTGTATACCAGGTTATAGACGAGAAAGTTGTCGTTTTCGTGATTTCTGTTGGGAAA
AGAGAACGCTCGGAAGTATATAGCGAGGCGGTCAAACGCATTCTCTGA
ATGGCGTATTTTCTGGATTTTGACGAGCGGGCACTAAAGGAATGGCGAAAGCTGGGCTCGACGGTACGTGAACAGTTGAA
AAAGAAGCTGGTTGAAGTACTTGAGTCACCCCGGATTGAAGCAAACAAGCTCCGTGGTATGCCTGATTGTTACAAGATTA
AGCTCCGGTCTTCAGGCTATCGCCTTGTATACCAGGTTATAGACGAGAAAGTTGTCGTTTTCGTGATTTCTGTTGGGAAA
AGAGAACGCTCGGAAGTATATAGCGAGGCGGTCAAACGCATTCTCTGA
Antitoxin
Download Length: 80 a.a. Molecular weight: 9018.43 Da Isoelectric Point: 4.3894
>AT207180 WP_004196370.1 NZ_CP077412:c7375-7136 [Enterobacter asburiae]
MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLCNPKPVRVTLDEL
MGSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEIVKERLCNPKPVRVTLDEL
Download Length: 240 bp
>AT207180 NZ_CP077412:c7375-7136 [Enterobacter asburiae]
ATGGGTAGCATTAACCTACGTATTGACGATGAACTTAAAGCGCGTTCTTACGCCGCGCTTGAAAAAATGGGCGTAACTCC
TTCTGAAGCGCTTCGTCTCATGCTCGAGTATATCGCTGACAATGAACGCTTGCCGTTCAAACAGACACTCCTGAGTGATG
AAGATGCTGAACTTGTGGAGATAGTGAAAGAACGACTTTGTAATCCTAAGCCAGTACGTGTGACGCTGGATGAACTCTGA
ATGGGTAGCATTAACCTACGTATTGACGATGAACTTAAAGCGCGTTCTTACGCCGCGCTTGAAAAAATGGGCGTAACTCC
TTCTGAAGCGCTTCGTCTCATGCTCGAGTATATCGCTGACAATGAACGCTTGCCGTTCAAACAGACACTCCTGAGTGATG
AAGATGCTGAACTTGTGGAGATAGTGAAAGAACGACTTTGTAATCCTAAGCCAGTACGTGTGACGCTGGATGAACTCTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|