Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 4704679..4704830 | Replicon | chromosome |
| Accession | NZ_CP077290 | ||
| Organism | Enterobacter cancerogenus strain FDAARGOS 1428 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 4704715..4704817 (+) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 4704679..4704830 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L58_RS22270 (I6L58_22270) | 4701162..4701824 | - | 663 | WP_088208265.1 | exodeoxyribonuclease X | - |
| I6L58_RS22275 (I6L58_22275) | 4701848..4702498 | - | 651 | WP_088208266.1 | carbon-nitrogen hydrolase family protein | - |
| I6L58_RS22280 (I6L58_22280) | 4702609..4702839 | - | 231 | WP_006176029.1 | DNA polymerase III subunit theta | - |
| I6L58_RS22285 (I6L58_22285) | 4702977..4703348 | + | 372 | WP_088208267.1 | CopC domain-containing protein YobA | - |
| I6L58_RS22290 (I6L58_22290) | 4703350..4704219 | + | 870 | WP_088208268.1 | copper homeostasis membrane protein CopD | - |
| I6L58_RS22295 (I6L58_22295) | 4704234..4704572 | + | 339 | WP_006176023.1 | YebY family protein | - |
| - | 4704679..4704830 | - | 152 | - | - | Antitoxin |
| - | 4704715..4704817 | + | 103 | - | - | Toxin |
| I6L58_RS22300 (I6L58_22300) | 4704981..4705922 | - | 942 | WP_058610200.1 | VirK/YbjX family protein | - |
| I6L58_RS22305 (I6L58_22305) | 4706092..4706736 | + | 645 | WP_088208269.1 | protein-serine/threonine phosphatase | - |
| I6L58_RS22310 (I6L58_22310) | 4706771..4707010 | - | 240 | WP_006176013.1 | YebV family protein | - |
| I6L58_RS22315 (I6L58_22315) | 4707116..4708564 | - | 1449 | WP_217060241.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 103 bp
>T206951 NZ_CP077290:4704715-4704817 [Enterobacter cancerogenus]
GCAAGGCGATTGAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATACA
GGAATCGTATTCGGTCTCTTTTT
GCAAGGCGATTGAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATACA
GGAATCGTATTCGGTCTCTTTTT
Antitoxin
Download Length: 152 bp
>AT206951 NZ_CP077290:c4704830-4704679 [Enterobacter cancerogenus]
CTTTCTTACAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGC
TAAAAGTTGGCATTAATGCAGGCTCAATCGCCTTGCACTTTAAGAATAGATGACGACGCCAGGTTTTCCAGT
CTTTCTTACAGATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGC
TAAAAGTTGGCATTAATGCAGGCTCAATCGCCTTGCACTTTAAGAATAGATGACGACGCCAGGTTTTCCAGT
