Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | TscAT/- |
| Location | 851218..851750 | Replicon | chromosome |
| Accession | NZ_CP076823 | ||
| Organism | Staphylococcus aureus strain ST59 | ||
Toxin (Protein)
| Gene name | TscT | Uniprot ID | Q93CD4 |
| Locus tag | KQY23_RS04035 | Protein ID | WP_001103942.1 |
| Coordinates | 851430..851750 (+) | Length | 107 a.a. |
Antitoxin (Protein)
| Gene name | TscA | Uniprot ID | - |
| Locus tag | KQY23_RS04030 | Protein ID | WP_001058486.1 |
| Coordinates | 851218..851427 (+) | Length | 70 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQY23_RS03985 (846236) | 846236..847456 | - | 1221 | WP_000266157.1 | site-specific integrase | - |
| KQY23_RS03990 (847545) | 847545..848273 | - | 729 | WP_000733774.1 | staphylococcal enterotoxin type K | - |
| KQY23_RS03995 (848297) | 848297..849025 | - | 729 | WP_001033316.1 | staphylococcal enterotoxin type Q | - |
| KQY23_RS04000 (849096) | 849096..849527 | - | 432 | WP_001228759.1 | hypothetical protein | - |
| KQY23_RS04005 (849544) | 849544..850002 | - | 459 | WP_000281657.1 | ImmA/IrrE family metallo-endopeptidase | - |
| KQY23_RS04010 (850014) | 850014..850346 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| KQY23_RS04015 (850539) | 850539..850802 | + | 264 | WP_000243851.1 | helix-turn-helix transcriptional regulator | - |
| KQY23_RS04020 (850795) | 850795..851067 | + | 273 | WP_000091731.1 | helix-turn-helix domain-containing protein | - |
| KQY23_RS04025 (851079) | 851079..851225 | + | 147 | WP_000784875.1 | hypothetical protein | - |
| KQY23_RS04030 (851218) | 851218..851427 | + | 210 | WP_001058486.1 | hypothetical protein | Antitoxin |
| KQY23_RS04035 (851430) | 851430..851750 | + | 321 | WP_001103942.1 | DUF1474 family protein | Toxin |
| KQY23_RS04040 (851814) | 851814..852683 | + | 870 | WP_216753101.1 | primase alpha helix C-terminal domain-containing protein | - |
| KQY23_RS04045 (852700) | 852700..854169 | + | 1470 | WP_000390454.1 | virulence-associated E family protein | - |
| KQY23_RS04050 (854455) | 854455..854817 | + | 363 | WP_001039168.1 | hypothetical protein | - |
| KQY23_RS04055 (854819) | 854819..855103 | + | 285 | WP_000998181.1 | hypothetical protein | - |
| KQY23_RS04060 (855100) | 855100..855741 | + | 642 | WP_001019764.1 | hypothetical protein | - |
| KQY23_RS04065 (856258) | 856258..856599 | + | 342 | WP_001190615.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | selk / selq / seb | 846236..861550 | 15314 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 107 a.a. Molecular weight: 12694.22 Da Isoelectric Point: 4.7419
>T206501 WP_001103942.1 NZ_CP076823:851430-851750 [Staphylococcus aureus]
MNWEIKDLMCDIEVIKQKINDVATKHAWFVEDRFVKNELETKREHINFSASYLEHRIQNEHTVELLHVYLKEFSELIQKF
HEIEKASSENFDEESDDAKNSIKVAE
MNWEIKDLMCDIEVIKQKINDVATKHAWFVEDRFVKNELETKREHINFSASYLEHRIQNEHTVELLHVYLKEFSELIQKF
HEIEKASSENFDEESDDAKNSIKVAE
Download Length: 321 bp
>T206501 NZ_CP102462:190032-190433 [Burkholderia contaminans]
ATGCCGCGCTACATGCTCGACACCAACATGTGCATCTACCTGATGAAGAATCAGCCGGAGCAGGTTGCGAGACGGTTTGC
GCAGTGCTACACGGGGGACGTCGTAATGTCGGCGATCACGTACGCCGAGCTCGAGTACGGTGTCGCGGCGTGCGCGAGCC
CTGCGCGGGAGCGCGGCAATCTTGCCGCGCTGATCGACGACATTCCCGTTGCGCCGTTCGACGTCGCGGCCGCGCAAGCG
TATGGCCCGGTCCGCGAGGCAACCCGGGAGCGGAAGAAGGATCACCTCGACAAGCTGATCGCCGCGCATGCGGTGTCGCT
CGATGTCGTACTCGTGACCAACAACGAGCGGGATTTCGTGAGCTATCCGGGACTGCGGCTGGAGAACTGGCTGGACGATT
GA
ATGCCGCGCTACATGCTCGACACCAACATGTGCATCTACCTGATGAAGAATCAGCCGGAGCAGGTTGCGAGACGGTTTGC
GCAGTGCTACACGGGGGACGTCGTAATGTCGGCGATCACGTACGCCGAGCTCGAGTACGGTGTCGCGGCGTGCGCGAGCC
CTGCGCGGGAGCGCGGCAATCTTGCCGCGCTGATCGACGACATTCCCGTTGCGCCGTTCGACGTCGCGGCCGCGCAAGCG
TATGGCCCGGTCCGCGAGGCAACCCGGGAGCGGAAGAAGGATCACCTCGACAAGCTGATCGCCGCGCATGCGGTGTCGCT
CGATGTCGTACTCGTGACCAACAACGAGCGGGATTTCGTGAGCTATCCGGGACTGCGGCTGGAGAACTGGCTGGACGATT
GA
Antitoxin
Download Length: 70 a.a. Molecular weight: 8252.31 Da Isoelectric Point: 4.3718
>AT206501 WP_001058486.1 NZ_CP076823:851218-851427 [Staphylococcus aureus]
MNNEQKEVIEHLVYQLELSVMNNLESYEHTEYVNGIEVVSEISREKHLELIMKWCAQELKNNFQLEKGE
MNNEQKEVIEHLVYQLELSVMNNLESYEHTEYVNGIEVVSEISREKHLELIMKWCAQELKNNFQLEKGE
Download Length: 210 bp
>AT206501 NZ_CP102462:189796-190032 [Burkholderia contaminans]
ATGCATACGACGAGGGTATTTCGGAACGGCAACTCGCAGGCCGTGCGAATTCCTGCCGACCTTGCCTATGAACGCAGCGA
TATCGAACTGGAAATCGAGCGCATTGGTGACGAAATCCGCATTCGGCCGGCGCGGCGGCCGTTGACCCGCGTCCTTGAGA
AATTCGCTAAATTCGGGCCGGATTTCATGGCGGATGGGCGCGGTGACCACGAGCAGGCCGATCGCGAGGGTTTGTGA
ATGCATACGACGAGGGTATTTCGGAACGGCAACTCGCAGGCCGTGCGAATTCCTGCCGACCTTGCCTATGAACGCAGCGA
TATCGAACTGGAAATCGAGCGCATTGGTGACGAAATCCGCATTCGGCCGGCGCGGCGGCCGTTGACCCGCGTCCTTGAGA
AATTCGCTAAATTCGGGCCGGATTTCATGGCGGATGGGCGCGGTGACCACGAGCAGGCCGATCGCGAGGGTTTGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|