Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/Phd(antitoxin)
Location 1173945..1174492 Replicon chromosome
Accession NZ_CP076643
Organism Vibrio ostreae strain OG9-811

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag KNV97_RS11420 Protein ID WP_136486642.1
Coordinates 1173945..1174247 (-) Length 101 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag KNV97_RS11425 Protein ID WP_136486645.1
Coordinates 1174235..1174492 (-) Length 86 a.a.

Genomic Context

KNV97_RS11385KNV97_RS11390KNV97_RS11395KNV97_RS11400KNV97_RS11405KNV97_RS11410KNV97_RS21975KNV97_RS11415KNV97_RS11420KNV97_RS11425KNV97_RS11430KNV97_RS11435KNV97_RS11440KNV97_RS11445KNV97_RS11450
Location: 1169234..1169554 (321 bp)
Type: Others
Protein ID: WP_218563142.1
Location: 1169719..1170240 (522 bp)
Type: Others
Protein ID: WP_218563143.1
Location: 1170357..1170794 (438 bp)
Type: Others
Protein ID: WP_136486636.1
Location: 1171189..1171521 (333 bp)
Type: Others
Protein ID: WP_218563144.1
Location: 1171745..1172158 (414 bp)
Type: Others
Protein ID: WP_218563422.1
Location: 1172297..1172815 (519 bp)
Type: Others
Protein ID: WP_218563145.1
Location: 1172859..1172963 (105 bp)
Type: Others
Protein ID: Protein_1029
Location: 1172964..1173701 (738 bp)
Type: Others
Protein ID: WP_218563146.1
Location: 1173945..1174247 (303 bp)
Type: Toxin
Protein ID: WP_136486642.1
Location: 1174235..1174492 (258 bp)
Type: Antitoxin
Protein ID: WP_136486645.1
Location: 1175043..1175606 (564 bp)
Type: Others
Protein ID: WP_218563147.1
Location: 1175826..1176038 (213 bp)
Type: Others
Protein ID: WP_218563148.1
Location: 1176063..1176176 (114 bp)
Type: Others
Protein ID: WP_218563423.1
Location: 1176177..1177019 (843 bp)
Type: Others
Protein ID: WP_218563149.1
Location: 1177135..1178685 (1551 bp)
Type: Others
Protein ID: WP_218563467.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
KNV97_RS11385 (KNV97_11385)1169234..1169554+321WP_218563142.1DUF1840 domain-containing protein-
KNV97_RS11390 (KNV97_11390)1169719..1170240+522WP_218563143.1DUF2058 domain-containing protein-
KNV97_RS11395 (KNV97_11395)1170357..1170794+438WP_136486636.1DUF3859 domain-containing protein-
KNV97_RS11400 (KNV97_11400)1171189..1171521+333WP_218563144.1SEC-C metal-binding domain-containing protein-
KNV97_RS11405 (KNV97_11405)1171745..1172158-414WP_218563422.1GFA family protein-
KNV97_RS11410 (KNV97_11410)1172297..1172815-519WP_218563145.1GNAT family N-acetyltransferase-
KNV97_RS219751172859..1172963-105Protein_1029DUF3265 domain-containing protein-
KNV97_RS11415 (KNV97_11415)1172964..1173701-738WP_218563146.1SDR family oxidoreductase-
KNV97_RS11420 (KNV97_11420)1173945..1174247-303WP_136486642.1type II toxin-antitoxin system RelE/ParE family toxinToxin
KNV97_RS11425 (KNV97_11425)1174235..1174492-258WP_136486645.1type II toxin-antitoxin system Phd/YefM family antitoxinAntitoxin
KNV97_RS11430 (KNV97_11430)1175043..1175606-564WP_218563147.1pyridoxamine 5'-phosphate oxidase family protein-
KNV97_RS11435 (KNV97_11435)1175826..1176038-213WP_218563148.1hypothetical protein-
KNV97_RS11440 (KNV97_11440)1176063..1176176-114WP_218563423.1DUF3265 domain-containing protein-
KNV97_RS11445 (KNV97_11445)1176177..1177019-843WP_218563149.1DUF5677 domain-containing protein-
KNV97_RS11450 (KNV97_11450)1177135..1178685-1551WP_218563467.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(4-91)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-73)


Sequences

Toxin        


Download         Length: 101 a.a.        Molecular weight: 11710.70 Da        Isoelectric Point: 5.1972

>T206062 WP_136486642.1 NZ_CP076643:c1174247-1173945 [Vibrio ostreae]
MAKIIWTEPVLSDLDDIAEYIALENFVAAKQLVQTIFAKVERLETLPESGRIPPELEHLSYREVVVNPCRVFYKQDGDKV
FILFVMRVERDLRKFLLSKQ

Download         Length: 303 bp

>T206062 NZ_CP102089:1013708-1013887 [Staphylococcus capitis subsp. capitis]
ATGAATAAAGAATATGAATCTAAATTGAATTATCATGAAGAAGAAAATGCTATGGTTACAGATTTAGATGATTTAAAAGA
ATTAGGAAAAGAAATGGAACAAATTTCAGAAGAAAATGATGAAGATAAATTAAACCAATCTCATGATGAAGATGTTCATT
CTGACCTTAATAATGAATAA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 9698.21 Da        Isoelectric Point: 6.7273

>AT206062 WP_136486645.1 NZ_CP076643:c1174492-1174235 [Vibrio ostreae]
MKVELVTSLKRQATKILADLHDTKEPVLITEHGKPSAYLVDVDDYEFMQNRLSILEGIARGERALTDGKMVSHEEAKDKM
SKWLK

Download         Length: 258 bp

>AT206062 NZ_CP102089:1013081-1013680 [Staphylococcus capitis subsp. capitis]
ATGGCAATGAACTTTAAAGTATTTGAAAATAGTGAAAGAGTAGCAGAATATGCTGCAGATATTATTCGTAAACAATTTAA
TAATAATCCAACTACAATTGCAGGTTTTCACTTAGAAAAAGATCACGCACCTGTATTAGATGAACTTAAGAAAAATGTAG
ATACGCATGCTGTAGATTTCAGCCAAATCAATATTTTAGATTATGATGATAATAGATCTTATTATGAAGCATTAGGTGTA
CCTGAAAGCCAAGTGTATTCAATTTCTTACGAACAAGATGCAATTGATTTTATTTCAGATAAAATGAAAACTAAAGAAAA
TAAAGGTAAATTAATCCTTCAAGTTCTTTCAATTGATGAAAGTGGCAAGTTAGATGTAAGTGTACGTCAAGGCCTTATGG
AAGCTAGAGAAATTTTCTTAGTTGTTACAGGTAGTAATAAACGTGAAGTTATTGAAAAACTTTATCGTGAAAACGGCAAA
TCTAGTTATGAGCCAGCAGATCTTAAAGCACACCGCATGGTAAATGTTATTTTAGATAAAGAAGCGGCTGCAGGATTACC
TGAGGATGTTAAAGAATACTTCACAGCACGTTATGTTTAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References