Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /RES-TIGR02293
Location 2422803..2423716 Replicon chromosome
Accession NZ_CP076605
Organism Raoultella ornithinolytica strain XF201

Toxin (Protein)


Gene name - Uniprot ID A0A808Y4A8
Locus tag KP007_RS11470 Protein ID WP_015584188.1
Coordinates 2422803..2423276 (-) Length 158 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID A0A808Y7A4
Locus tag KP007_RS11475 Protein ID WP_004862777.1
Coordinates 2423273..2423716 (-) Length 148 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

RES domain

(3-148)

Antitoxin

Antitoxin Xre

(15-147)


Sequences

Toxin        


Download         Length: 158 a.a.        Molecular weight: 17524.82 Da        Isoelectric Point: 4.8081

>T206046 WP_015584188.1 NZ_CP076605:c2423276-2422803 [Raoultella ornithinolytica]
MIFYRLVTGRYASEAWTGSGANQYGGRWNHQGHPAVYVSTSIALASLEILVHVKNEAILNQYQLYSIEIPDSEVESLDKQ
WLPDNWQENPMPVSTMDLGTGWLQSGSGLALMLPSCIIPYENNAILNPLHPAFSEALASVRQYPFTFDPRLARSTPL

Download         Length: 474 bp

>T206046 NZ_CP102085:1418224-1418529 [Mycoavidus sp. SF9855]
ATGATTGAAATTATCCAAAGTACGACATTTAGCGCCTGGTTGAGTGATCTGAAGGATCGACAGGCACGAGCGCGTATCCA
AGTGCGGCTTGATCGTATAAGAAATGGAAATTTTGGTGATGTAAAGCCAATTGGTAACGGTTTAAGCGAAGCTCGTATTC
ACTATGGAAATGGTTATCGCCTCTATTTTTTACAGCATAAGAAAGAACTGGTTGTGTTGTTGTGTGGCGGAGATAAAAGC
ACTCAAAGTAGGGATATAGAGCAGGCAAAACGCATTGCACAAGAATGGACGGAGTCAATACTATGA

Antitoxin


Download         Length: 148 a.a.        Molecular weight: 16190.45 Da        Isoelectric Point: 4.9405

>AT206046 WP_004862777.1 NZ_CP076605:c2423716-2423273 [Raoultella ornithinolytica]
MKTWVPAEQPADNALWRYAGLPANRGMQLIELLSMGLPVSILDNIHEWTEMSKTDILRITGINERNVARRKSAGGTLTPG
ESERVARFVRVLDTAVDYFGSKQDAYDWLQSPVRGLGNVAPIDLIATESGALEVTDLIGRLEHGVFA

Download         Length: 444 bp

>AT206046 NZ_CP102085:1418526-1418834 [Mycoavidus sp. SF9855]
ATGACCGAAAAATTTACTCGATACGATACAGCTGAATATCTGAAAACCGATGAAGATATAGCGGCTTATTTCGATGCTGT
ACTGGAAGAGAATGATCCTCAATTGGCTGTACAAGCGTTGGGTACCATCGCACGCGCTAAAGGAATGAGCCAAATTGCAC
AGGAGACGGGACTTGCCCGCGAAAGTCTATACAGAGCACTTTCTGACACAGGTAACCCGGAATTTGCCACTGTATTTAAA
GTGATCCGTGCGCTTGGCTTACAATTGCACGCCTCACTGCCCCCTATCCAGTATAACGTTGCAGGCTAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A808Y4A8

Antitoxin

Source ID Structure
AlphaFold DB A0A808Y7A4

References