Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 2081206..2081244 | Replicon | chromosome |
| Accession | NZ_CP074545 | ||
| Organism | Klebsiella aerogenes strain S33_CRE34 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 2081206..2081236 (+) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 2081206..2081244 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHW00_RS10020 (KHW00_10030) | 2077261..2079528 | + | 2268 | WP_050595190.1 | right-handed parallel beta-helix repeat-containing protein | - |
| KHW00_RS10025 (KHW00_10035) | 2079528..2080961 | + | 1434 | WP_032716195.1 | hypothetical protein | - |
| - | 2081206..2081236 | + | 31 | - | - | Toxin |
| - | 2081206..2081244 | - | 39 | - | - | Antitoxin |
| KHW00_RS10030 (KHW00_10040) | 2081364..2082317 | - | 954 | WP_072207417.1 | spore coat U domain-containing protein | - |
| KHW00_RS10035 (KHW00_10045) | 2082330..2084654 | - | 2325 | WP_032705949.1 | fimbria/pilus outer membrane usher protein | - |
| KHW00_RS10040 (KHW00_10050) | 2084657..2085406 | - | 750 | WP_015366013.1 | molecular chaperone | - |
| KHW00_RS10045 (KHW00_10055) | 2085424..2085942 | - | 519 | WP_015366014.1 | spore coat U domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 2033297..2104078 | 70781 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
